ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100795083	uncharacterized LOC100795083
gma-r.7	100795083	uncharacterized LOC100795083
gma-u.5	100791750	uncharacterized LOC100791750
gma-u.5	100527383	uncharacterized LOC100527383
gma-u.5	100815116	60S ribosomal protein L18a-like protein
mtr-u.5	25494202	uncharacterized LOC25494202
mtr-u.5	11421247	60S ribosomal protein L18a-like protein
ppo-u.5	7497598	60S ribosomal protein L18a-like protein
ppo-u.5	7480506	60S ribosomal protein L18a-like protein
ppo-u.5	18094842	60S ribosomal protein L18a-like protein
ath-u.5	AT4G26060	Ribosomal protein L18ae family
ath-u.5	AT5G57060	60S ribosomal L18a-like protein
ath-u.5	AT1G54217	Ribosomal protein L18ae family
bra-r.6	103832751	60S ribosomal protein L18a-like protein
bra-r.6	103845143	60S ribosomal protein L18a-like protein
vvi-u.5	100258284	large ribosomal subunit protein eL20z
vvi-u.5	100255931	uncharacterized LOC100255931
ghi-r.1	107904322	60S ribosomal protein L18a-like protein
ghi-r.1	107916401	60S ribosomal protein L18a-like protein
ghi-r.1	107920693	60S ribosomal protein L18a-like protein
bna-r.1	106371499	60S ribosomal protein L18a-like protein
cit-r.1	102626981	uncharacterized LOC102626981
cit-r.1	102615644	uncharacterized LOC102615644
sly-u.5	101261044	uncharacterized LOC101261044
sly-u.5	101256190	large ribosomal subunit protein eL20z-like
sot-r.1	102593747	uncharacterized LOC102593747
nta-r.1	107762904	uncharacterized LOC107762904
nta-r.1	107771466	uncharacterized LOC107771466
nta-r.1	107785911	large ribosomal subunit protein eL20z
osa-u.5	9270086	large ribosomal subunit protein eL20z
osa-u.5	9269019	large ribosomal subunit protein eL20z
zma-u.5	107546744	uncharacterized LOC107546744
zma-u.5	103649661	uncharacterized LOC103649661
zma-u.5	100274933	uncharacterized LOC100274933
tae-r.2	123060419	60S ribosomal protein L18a-like protein
tae-r.2	123040834	60S ribosomal protein L18a-like protein
hvu-r.1	123442943	60S ribosomal protein L18a-like protein
hvu-r.1	123427081	60S ribosomal protein L18a-like protein
sbi-r.1	8084381	60S ribosomal protein L18a-like protein
sbi-r.1	8080968	60S ribosomal protein L18a-like protein
bdi-r.1	100823552	60S ribosomal protein L18a-like protein
bdi-r.1	100824901	60S ribosomal protein L18a-like protein

Top 50 coexpressed genes to 100795083 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100795083 (gma-u.5 coexpression data)

CoexMap"100795083"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003551168.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, E.R. 2, cyto_nucl 2, chlo 1, vacu 1

(predict for XP_003551168.1)

Subcellular
localization
TargetP

other 8, mito 3

(predict for XP_003551168.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100795083	gma-r.7 for 100795083	gma-u.5 for 100791750	gma-u.5 for 100527383	gma-u.5 for 100815116	mtr-u.5 for 25494202	mtr-u.5 for 11421247	ppo-u.5 for 7497598	ppo-u.5 for 7480506	ppo-u.5 for 18094842	ath-u.5 for AT4G26060	ath-u.5 for AT5G57060	ath-u.5 for AT1G54217	bra-r.6 for 103832751	bra-r.6 for 103845143	vvi-u.5 for 100258284	vvi-u.5 for 100255931	ghi-r.1 for 107904322	ghi-r.1 for 107916401	ghi-r.1 for 107920693	bna-r.1 for 106371499	cit-r.1 for 102626981	cit-r.1 for 102615644	sly-u.5 for 101261044	sly-u.5 for 101256190	sot-r.1 for 102593747	nta-r.1 for 107762904	nta-r.1 for 107771466	nta-r.1 for 107785911	osa-u.5 for 9270086	osa-u.5 for 9269019	zma-u.5 for 107546744	zma-u.5 for 103649661	zma-u.5 for 100274933	tae-r.2 for 123060419	tae-r.2 for 123040834	hvu-r.1 for 123442943	hvu-r.1 for 123427081	sbi-r.1 for 8084381	sbi-r.1 for 8080968	bdi-r.1 for 100823552	bdi-r.1 for 100824901

Ortholog

Ortholog ID: 2097

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100527383

60S ribosomal protein L18a-like protein

uncharacterized LOC100306083

uncharacterized LOC25494202

60S ribosomal protein L18a-like protein

uncharacterized LOC7476663

Ribosomal protein L18ae family

60S ribosomal L18a-like protein

Ribosomal protein L18ae family

60S ribosomal protein L18a-like protein

large ribosomal subunit protein eL20z

uncharacterized LOC100255931

60S ribosomal protein L18a-like protein

uncharacterized LOC107929860

uncharacterized LOC106373936

uncharacterized LOC106429466

uncharacterized LOC102626981

uncharacterized LOC102615644

uncharacterized LOC101261044

large ribosomal subunit protein eL20z-like

uncharacterized LOC102593747

uncharacterized LOC107771466

large ribosomal subunit protein eL20z

large ribosomal subunit protein eL20z-like

large ribosomal subunit protein eL20z

uncharacterized LOC107546744

uncharacterized LOC103649661

uncharacterized LOC100274933

60S ribosomal protein L18a-like protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma00541	Biosynthesis of various nucleotide sugars	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	2
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00240	Pyrimidine metabolism	3
ath00410	beta-Alanine metabolism	3
ath00770	Pantothenate and CoA biosynthesis	3
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	6
ghi04075	Plant hormone signal transduction	6
ghi00310	Lysine degradation	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03083	Polycomb repressive complex	2
cit04120	Ubiquitin mediated proteolysis	2
cit04141	Protein processing in endoplasmic reticulum	2
cit03010	Ribosome	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	3
cit04136	Autophagy - other	2
cit00564	Glycerophospholipid metabolism	2
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00030	Pentose phosphate pathway	2
sly01200	Carbon metabolism	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	3
nta04120	Ubiquitin mediated proteolysis	3
nta04141	Protein processing in endoplasmic reticulum	3
nta00562	Inositol phosphate metabolism	2
nta00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	3
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta00230	Purine metabolism	2
nta00730	Thiamine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	5
osa01200	Carbon metabolism	4
osa00020	Citrate cycle (TCA cycle)	3
osa00270	Cysteine and methionine metabolism	3
osa01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	7
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3
tae00730	Thiamine metabolism	3
tae01232	Nucleotide metabolism	3
tae01240	Biosynthesis of cofactors	3
tae04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3
tae00061	Fatty acid biosynthesis	3
tae01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03420	Nucleotide excision repair	3
tae04141	Protein processing in endoplasmic reticulum	3
tae04144	Endocytosis	3
tae00061	Fatty acid biosynthesis	3
tae01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4
sbi03083	Polycomb repressive complex	3
sbi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100527383

100815116

100306083

25494202

11421247

7497598

7480506

7476663

828712

835810

2745829

103845143

103832624

100258284

100255931

107904322

107920693

107929860

106373936

106429466

102626981

102615644

101261044

101256190

102593747

107771466

107785911

107818451

9270086

9269019

107546744

103649661

100274933

123040834

123068959

123077489

123442943

123427081

8084381

8080968

100823552

100824901

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	3	2	2	3	1	2	2	1	3	2	3	2	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100795083 (gma-u.5 coexpression data)

Top 50 enrichment test to 100795083 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**