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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G54217   Ribosomal protein L18ae family 
 ath-r.7   AT1G54217   Ribosomal protein L18ae family 
 ath-e.2   AT1G54217   Ribosomal protein L18ae family 
 ath-u.5   AT4G26060   Ribosomal protein L18ae family 
 ath-u.5   AT5G57060   60S ribosomal L18a-like protein 
 bra-r.6   103834850   uncharacterized LOC103834850 
 bra-r.6   103845143   60S ribosomal protein L18a-like protein 
 bra-r.6   103832751   60S ribosomal protein L18a-like protein 
 bna-r.1   106371499   60S ribosomal protein L18a-like protein 
 ghi-r.1   107904322   60S ribosomal protein L18a-like protein 
 ghi-r.1   107916401   60S ribosomal protein L18a-like protein 
 ghi-r.1   107920693   60S ribosomal protein L18a-like protein 
 cit-r.1   102626981   uncharacterized LOC102626981 
 cit-r.1   102615644   uncharacterized LOC102615644 
 gma-u.5   100795083   uncharacterized LOC100795083 
 gma-u.5   100791750   uncharacterized LOC100791750 
 gma-u.5   100306083   uncharacterized LOC100306083 
 vvi-u.5   100258284   large ribosomal subunit protein eL20z 
 vvi-u.5   100255931   uncharacterized LOC100255931 
 ppo-u.5   7497598   60S ribosomal protein L18a-like protein 
 ppo-u.5   7480506   60S ribosomal protein L18a-like protein 
 ppo-u.5   18094842   60S ribosomal protein L18a-like protein 
 mtr-u.5   25494202   uncharacterized LOC25494202 
 mtr-u.5   11421247   60S ribosomal protein L18a-like protein 
 sly-u.5   101261044   uncharacterized LOC101261044 
 sly-u.5   101256190   large ribosomal subunit protein eL20z-like 
 sot-r.1   102593747   uncharacterized LOC102593747 
 nta-r.1   107762904   uncharacterized LOC107762904 
 nta-r.1   107771466   uncharacterized LOC107771466 
 nta-r.1   107785911   large ribosomal subunit protein eL20z 
 osa-u.5   9269019   large ribosomal subunit protein eL20z 
 osa-u.5   9270086   large ribosomal subunit protein eL20z 
 zma-u.5   107546744   uncharacterized LOC107546744 
 zma-u.5   100274933   uncharacterized LOC100274933 
 zma-u.5   103649661   uncharacterized LOC103649661 
 tae-r.2   123060419   60S ribosomal protein L18a-like protein 
 tae-r.2   123040834   60S ribosomal protein L18a-like protein 
 hvu-r.1   123442943   60S ribosomal protein L18a-like protein 
 hvu-r.1   123427081   60S ribosomal protein L18a-like protein 
 sbi-r.1   8084381   60S ribosomal protein L18a-like protein 
 sbi-r.1   8080968   60S ribosomal protein L18a-like protein 
 bdi-r.1   100823552   60S ribosomal protein L18a-like protein 
 bdi-r.1   100824901   60S ribosomal protein L18a-like protein 

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Top 50 coexpressed genes to AT1G54217 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G54217 (ath-u.5 coexpression data)

CoexMap"2745829"


athAT1G54217 | Entrez gene ID : 2745829      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 1 3 2 3 2 3 2 2 1 3 2 3 2 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001154423.1 [sequence] [blastp]
NP_001154424.1 [sequence] [blastp]
NP_001321217.1 [sequence] [blastp]
NP_001321218.1 [sequence] [blastp]
NP_001321219.1 [sequence] [blastp]
NP_001321220.1 [sequence] [blastp]
NP_001321221.1 [sequence] [blastp]
NP_974022.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  plas 3,  cyto_plas 3,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001154423.1)
cyto 4,  plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001154424.1)
cyto 4,  plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001321217.1)
cyto 4,  plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001321218.1)
cyto 3,  plas 3,  cyto_plas 3,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001321219.1)
cyto 4,  plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001321220.1)
cyto 4,  plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001321221.1)
cyto 4,  plas 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_974022.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001154423.1)
other 9  (predict for NP_001154424.1)
other 9  (predict for NP_001321217.1)
other 9  (predict for NP_001321218.1)
other 9  (predict for NP_001321219.1)
other 9  (predict for NP_001321220.1)
other 9  (predict for NP_001321221.1)
other 9  (predict for NP_974022.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G54217
ath-r.7
for
AT1G54217
ath-e.2
for
AT1G54217
ath-u.5
for
AT4G26060
ath-u.5
for
AT5G57060
bra-r.6
for
103834850
bra-r.6
for
103845143
bra-r.6
for
103832751
bna-r.1
for
106371499
ghi-r.1
for
107904322
ghi-r.1
for
107916401
ghi-r.1
for
107920693
cit-r.1
for
102626981
cit-r.1
for
102615644
gma-u.5
for
100795083
gma-u.5
for
100791750
gma-u.5
for
100306083
vvi-u.5
for
100258284
vvi-u.5
for
100255931
ppo-u.5
for
7497598
ppo-u.5
for
7480506
ppo-u.5
for
18094842
mtr-u.5
for
25494202
mtr-u.5
for
11421247
sly-u.5
for
101261044
sly-u.5
for
101256190
sot-r.1
for
102593747
nta-r.1
for
107762904
nta-r.1
for
107771466
nta-r.1
for
107785911
osa-u.5
for
9269019
osa-u.5
for
9270086
zma-u.5
for
107546744
zma-u.5
for
100274933
zma-u.5
for
103649661
tae-r.2
for
123060419
tae-r.2
for
123040834
hvu-r.1
for
123442943
hvu-r.1
for
123427081
sbi-r.1
for
8084381
sbi-r.1
for
8080968
bdi-r.1
for
100823552
bdi-r.1
for
100824901


Ortholog ID: 2097
Species ath ath ath bra bra bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol AT1G54217 AT4G26060 AT5G57060 LOC103845143 LOC103832624 LOC106373936 LOC106429466 LOC107904322 LOC107920693 LOC107929860 LOC102626981 LOC102615644 LOC100306083 LOC100815116 LOC100527383 LOC100258284 LOC100255931 LOC7497598 LOC7480506 LOC7476663 LOC25494202 LOC11421247 LOC101261044 LOC101256190 LOC102593747 LOC107771466 LOC107785911 LOC107818451 LOC9269019 LOC9270086 LOC107546744 LOC100274933 LOC103649661 LOC123040834 LOC123068959 LOC123077489 LOC123442943 LOC123427081 LOC8084381 LOC8080968 LOC100823552 LOC100824901
Function* Ribosomal protein L18ae family Ribosomal protein L18ae family 60S ribosomal L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein uncharacterized LOC106373936 uncharacterized LOC106429466 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein uncharacterized LOC107929860 uncharacterized LOC102626981 uncharacterized LOC102615644 uncharacterized LOC100306083 60S ribosomal protein L18a-like protein uncharacterized LOC100527383 large ribosomal subunit protein eL20z uncharacterized LOC100255931 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein uncharacterized LOC7476663 uncharacterized LOC25494202 60S ribosomal protein L18a-like protein uncharacterized LOC101261044 large ribosomal subunit protein eL20z-like uncharacterized LOC102593747 uncharacterized LOC107771466 large ribosomal subunit protein eL20z large ribosomal subunit protein eL20z-like large ribosomal subunit protein eL20z large ribosomal subunit protein eL20z uncharacterized LOC107546744 uncharacterized LOC100274933 uncharacterized LOC103649661 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein 60S ribosomal protein L18a-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00240 Pyrimidine metabolism 3
ath00410 beta-Alanine metabolism 3
ath00770 Pantothenate and CoA biosynthesis 3
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi00310 Lysine degradation 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
cit03010 Ribosome 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04136 Autophagy - other 2
cit00564 Glycerophospholipid metabolism 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00030 Pentose phosphate pathway 2
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta04120 Ubiquitin mediated proteolysis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 4
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa01200 Carbon metabolism 4
osa00020 Citrate cycle (TCA cycle) 3
osa00270 Cysteine and methionine metabolism 3
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00730 Thiamine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
tae00061 Fatty acid biosynthesis 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
tae00061 Fatty acid biosynthesis 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
sbi03083 Polycomb repressive complex 3
sbi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 2745829 828712 835810 103845143 103832624 106373936 106429466 107904322 107920693 107929860 102626981 102615644 100306083 100815116 100527383 100258284 100255931 7497598 7480506 7476663 25494202 11421247 101261044 101256190 102593747 107771466 107785911 107818451 9269019 9270086 107546744 100274933 103649661 123040834 123068959 123077489 123442943 123427081 8084381 8080968 100823552 100824901
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