ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100797045	uncharacterized LOC100797045
gma-r.7	100797045	uncharacterized LOC100797045
gma-m.5	100797045	uncharacterized LOC100797045
mtr-u.5	11410330	uncharacterized LOC11410330
ppo-u.5	7454009	uncharacterized LOC7454009
ath-u.5	AT3G18310	TATA box-binding protein associated factor RNA polymerase I subunit C
bra-r.6	103869575	uncharacterized LOC103869575
vvi-u.5	104882767	hypothetical protein
ghi-r.1	107898072	uncharacterized LOC107898072
ghi-r.1	107939860	uncharacterized LOC107939860
ghi-r.1	107941698	uncharacterized LOC107941698
bna-r.1	106436027	uncharacterized LOC106436027
bna-r.1	106451953	uncharacterized LOC106451953
cit-r.1	102613824	uncharacterized LOC102613824
sot-r.1	107057673	uncharacterized LOC107057673
nta-r.1	107785303	uncharacterized LOC107785303
nta-r.1	107774499	uncharacterized LOC107774499
osa-u.5	4332202	uncharacterized LOC4332202
zma-u.5	103639375	uncharacterized LOC103639375
tae-r.2	123098109	uncharacterized LOC123098109
tae-r.2	123085211	uncharacterized LOC123085211
tae-r.2	123092818	uncharacterized LOC123092818
hvu-r.1	123449191	uncharacterized LOC123449191
sbi-r.1	8056823	uncharacterized LOC8056823
bdi-r.1	100826696	uncharacterized LOC100826696

Annotation

functional annotation

KEGG

GO BP

GO:0006360 [list] [network] transcription by RNA polymerase I

(21 genes)

IEA

GO CC

GO:0001650 [list] [network] fibrillar center

(1 genes)

IEA

GO MF

GO:0001164 [list] [network] RNA polymerase I core promoter sequence-specific DNA binding

(2 genes)

IEA

Protein

XP_006588648.1 [sequence] [blastp]
XP_006588649.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 2, E.R. 2, cyto_pero 2, cyto_plas 2	(predict for XP_006588648.1)
cyto 4, nucl 2, E.R. 2, cyto_pero 2, cyto_plas 2	(predict for XP_006588649.1)

Subcellular
localization
TargetP

chlo 4, other 3	(predict for XP_006588648.1)
chlo 4, other 3	(predict for XP_006588649.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100797045	gma-r.7 for 100797045	gma-m.5 for 100797045	mtr-u.5 for 11410330	ppo-u.5 for 7454009	ath-u.5 for AT3G18310	bra-r.6 for 103869575	vvi-u.5 for 104882767	ghi-r.1 for 107898072	ghi-r.1 for 107939860	ghi-r.1 for 107941698	bna-r.1 for 106436027	bna-r.1 for 106451953	cit-r.1 for 102613824	sot-r.1 for 107057673	nta-r.1 for 107785303	nta-r.1 for 107774499	osa-u.5 for 4332202	zma-u.5 for 103639375	tae-r.2 for 123098109	tae-r.2 for 123085211	tae-r.2 for 123092818	hvu-r.1 for 123449191	sbi-r.1 for 8056823	bdi-r.1 for 100826696

Ortholog

Ortholog ID: 9490

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100797045

uncharacterized LOC11410330

uncharacterized LOC7454009

TATA box-binding protein associated factor RNA polymerase I subunit C

uncharacterized LOC103869575

hypothetical protein

uncharacterized LOC107898072

uncharacterized LOC107939860

uncharacterized LOC107941698

uncharacterized LOC106436027

uncharacterized LOC106451953

uncharacterized LOC102613824

uncharacterized LOC107057673

uncharacterized LOC107785303

uncharacterized LOC107774499

uncharacterized LOC4332202

uncharacterized LOC103639375

uncharacterized LOC123098109

uncharacterized LOC123085211

uncharacterized LOC123092818

uncharacterized LOC123449191

uncharacterized LOC8056823

uncharacterized LOC100826696

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00630	Glyoxylate and dicarboxylate metabolism	6
ghi01200	Carbon metabolism	4
ghi00380	Tryptophan metabolism	2
ghi04016	MAPK signaling pathway - plant	2
ghi04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	7
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

100797045

11410330

7454009

821360

103869575

104882767

107898072

107939860

107941698

106436027

106451953

102613824

107057673

107785303

107774499

4332202

103639375

123098109

123085211

123092818

123449191

8056823

100826696

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100797045 (gma-u.5 coexpression data)

Top 50 enrichment test to 100797045 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	sly
Paralog	3	1	1	1	1	1	3	2	1	1	2	1	1	3	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100797045 (gma-u.5 coexpression data)

Top 50 enrichment test to 100797045 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**