ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100799446	protein OCTOPUS
gma-r.7	100799446	protein OCTOPUS
gma-m.5	100799446	protein OCTOPUS
gma-u.5	100807102	protein OCTOPUS
mtr-u.5	25498706	protein OCTOPUS
ppo-u.5	7466049	protein OCTOPUS
ppo-u.5	7487297	protein OCTOPUS
ath-u.5	AT2G38070	LOW protein: UPF0503-like protein, putative (DUF740)
ath-u.5	OPS	LOW protein: UPF0503-like protein, putative (DUF740)
ath-u.5	AT5G01170	hypothetical protein (DUF740)
bra-r.6	103859310	protein OCTOPUS
bra-r.6	103865648	protein OCTOPUS
bra-r.6	103848299	protein OCTOPUS
vvi-u.5	100251888	protein OCTOPUS
vvi-u.5	100263034	protein OCTOPUS
ghi-r.1	107930147	protein OCTOPUS
ghi-r.1	107905645	protein OCTOPUS
ghi-r.1	107899040	protein OCTOPUS
bna-r.1	106352984	protein OCTOPUS-like
bna-r.1	106403134	protein OCTOPUS
sly-u.5	101243925	uncharacterized LOC101243925
sly-u.5	101256822	protein OCTOPUS
sot-r.1	102583781	UPF0503 protein At3g09070, chloroplastic-like
sot-r.1	102579926	UPF0503 protein At3g09070, chloroplastic-like
nta-r.1	107789019	protein OCTOPUS-like
nta-r.1	107785701	protein OCTOPUS-like
nta-r.1	107782953	protein OCTOPUS-like
osa-u.5	4338959	protein OCTOPUS
osa-u.5	9267710	protein OCTOPUS
osa-u.5	4324814	protein OCTOPUS
zma-u.5	103630391	protein OCTOPUS
zma-u.5	100217015	uncharacterized LOC100217015
zma-u.5	103635597	protein OCTOPUS
tae-r.2	123096722	protein OCTOPUS-like
tae-r.2	123058376	protein OCTOPUS
tae-r.2	123062620	protein OCTOPUS
hvu-r.1	123448226	protein OCTOPUS-like
hvu-r.1	123440523	protein OCTOPUS-like
hvu-r.1	123415280	protein OCTOPUS-like
sbi-r.1	8061749	UPF0503 protein At3g09070, chloroplastic
sbi-r.1	8060107	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	100828984	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	100842841	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	104581871	UPF0503 protein At3g09070, chloroplastic-like

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(1870 genes)

IEA

GO MF

Protein

XP_040872994.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 3, cyto_nucl 3, cysk_nucl 3

(predict for XP_040872994.1)

Subcellular
localization
TargetP

chlo 7

(predict for XP_040872994.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100799446	gma-r.7 for 100799446	gma-m.5 for 100799446	gma-u.5 for 100807102	mtr-u.5 for 25498706	ppo-u.5 for 7466049	ppo-u.5 for 7487297	ath-u.5 for AT2G38070	ath-u.5 for OPS	ath-u.5 for AT5G01170	bra-r.6 for 103859310	bra-r.6 for 103865648	bra-r.6 for 103848299	vvi-u.5 for 100251888	vvi-u.5 for 100263034	ghi-r.1 for 107930147	ghi-r.1 for 107905645	ghi-r.1 for 107899040	bna-r.1 for 106352984	bna-r.1 for 106403134	sly-u.5 for 101243925	sly-u.5 for 101256822	sot-r.1 for 102583781	sot-r.1 for 102579926	nta-r.1 for 107789019	nta-r.1 for 107785701	nta-r.1 for 107782953	osa-u.5 for 4338959	osa-u.5 for 9267710	osa-u.5 for 4324814	zma-u.5 for 103630391	zma-u.5 for 100217015	zma-u.5 for 103635597	tae-r.2 for 123096722	tae-r.2 for 123058376	tae-r.2 for 123062620	hvu-r.1 for 123448226	hvu-r.1 for 123440523	hvu-r.1 for 123415280	sbi-r.1 for 8061749	sbi-r.1 for 8060107	bdi-r.1 for 100828984	bdi-r.1 for 100842841	bdi-r.1 for 104581871

Ortholog

Ortholog ID: 2325

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

OPS

Function^*

protein OCTOPUS

LOW protein: UPF0503-like protein, putative (DUF740)

hypothetical protein (DUF740)

protein OCTOPUS

protein OCTOPUS-like

protein OCTOPUS

protein OCTOPUS-like

protein OCTOPUS

protein OCTOPUS-like

uncharacterized LOC101243925

protein OCTOPUS

UPF0503 protein At3g09070, chloroplastic-like

protein OCTOPUS-like

protein OCTOPUS

uncharacterized LOC100217015

protein OCTOPUS

protein OCTOPUS-like

UPF0503 protein At3g09070, chloroplastic

UPF0503 protein At3g09070, chloroplastic-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	5
sbi04517	IgSF CAM signaling	5
sbi04814	Motor proteins	5

Expression

Expression pattern

Entrez Gene ID^*

100799446

100807102

25498706

7466049

7487297

818385

820060

831732

103865648

103848299

103847495

100251888

100263034

107930147

107905645

107958036

106435870

106439216

106447655

101243925

101256822

102583781

102579926

107789019

107782953

107811433

4338959

9267710

4324814

103630391

100217015

103635597

123062620

123079777

123091739

123448226

123440523

123415280

8061749

8060107

100828984

100842841

104581871

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100799446 (gma-u.5 coexpression data)

Top 50 enrichment test to 100799446 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cit	cre
Paralog	4	1	2	3	3	2	3	2	2	2	3	3	3	3	3	2	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100799446 (gma-u.5 coexpression data)

Top 50 enrichment test to 100799446 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**