ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107899040	protein OCTOPUS
ghi-r.1	107930147	protein OCTOPUS
ghi-r.1	107905645	protein OCTOPUS
ghi-r.1	107898848	protein OCTOPUS
ath-u.5	AT2G38070	LOW protein: UPF0503-like protein, putative (DUF740)
ath-u.5	OPS	LOW protein: UPF0503-like protein, putative (DUF740)
ath-u.5	AT5G01170	hypothetical protein (DUF740)
bra-r.6	103847495	protein OCTOPUS-like
bra-r.6	103848299	protein OCTOPUS
bra-r.6	103859310	protein OCTOPUS
bna-r.1	106447655	protein OCTOPUS-like
bna-r.1	106352984	protein OCTOPUS-like
gma-u.5	100807102	protein OCTOPUS
gma-u.5	100799446	protein OCTOPUS
vvi-u.5	100263034	protein OCTOPUS
vvi-u.5	100251888	protein OCTOPUS
ppo-u.5	7466049	protein OCTOPUS
ppo-u.5	7487297	protein OCTOPUS
mtr-u.5	25498706	protein OCTOPUS
sly-u.5	101256822	protein OCTOPUS
sly-u.5	101243925	uncharacterized LOC101243925
sot-r.1	102583781	UPF0503 protein At3g09070, chloroplastic-like
sot-r.1	102579926	UPF0503 protein At3g09070, chloroplastic-like
nta-r.1	107782953	protein OCTOPUS-like
nta-r.1	107785701	protein OCTOPUS-like
nta-r.1	107811433	protein OCTOPUS-like
osa-u.5	4338959	protein OCTOPUS
osa-u.5	4324814	protein OCTOPUS
osa-u.5	9267710	protein OCTOPUS
zma-u.5	103630391	protein OCTOPUS
zma-u.5	103635597	protein OCTOPUS
zma-u.5	103651003	protein OCTOPUS
tae-r.2	123079777	protein OCTOPUS
tae-r.2	123086303	protein OCTOPUS
tae-r.2	123062620	protein OCTOPUS
hvu-r.1	123448226	protein OCTOPUS-like
hvu-r.1	123440523	protein OCTOPUS-like
hvu-r.1	123415280	protein OCTOPUS-like
sbi-r.1	8060107	UPF0503 protein At3g09070, chloroplastic
sbi-r.1	8061749	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	100828984	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	100842841	UPF0503 protein At3g09070, chloroplastic
bdi-r.1	104581871	UPF0503 protein At3g09070, chloroplastic-like

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane

(2553 genes)

IEA

GO MF

Protein

XP_016680127.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_016680127.2)

Subcellular
localization
TargetP

chlo 7, other 3

(predict for XP_016680127.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107899040	ghi-r.1 for 107930147	ghi-r.1 for 107905645	ghi-r.1 for 107898848	ath-u.5 for AT2G38070	ath-u.5 for OPS	ath-u.5 for AT5G01170	bra-r.6 for 103847495	bra-r.6 for 103848299	bra-r.6 for 103859310	bna-r.1 for 106447655	bna-r.1 for 106352984	gma-u.5 for 100807102	gma-u.5 for 100799446	vvi-u.5 for 100263034	vvi-u.5 for 100251888	ppo-u.5 for 7466049	ppo-u.5 for 7487297	mtr-u.5 for 25498706	sly-u.5 for 101256822	sly-u.5 for 101243925	sot-r.1 for 102583781	sot-r.1 for 102579926	nta-r.1 for 107782953	nta-r.1 for 107785701	nta-r.1 for 107811433	osa-u.5 for 4338959	osa-u.5 for 4324814	osa-u.5 for 9267710	zma-u.5 for 103630391	zma-u.5 for 103635597	zma-u.5 for 103651003	tae-r.2 for 123079777	tae-r.2 for 123086303	tae-r.2 for 123062620	hvu-r.1 for 123448226	hvu-r.1 for 123440523	hvu-r.1 for 123415280	sbi-r.1 for 8060107	sbi-r.1 for 8061749	bdi-r.1 for 100828984	bdi-r.1 for 100842841	bdi-r.1 for 104581871

Ortholog

Ortholog ID: 2325

Species

ghi

ath

bra

bna

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

OPS

Function^*

protein OCTOPUS

protein OCTOPUS-like

LOW protein: UPF0503-like protein, putative (DUF740)

hypothetical protein (DUF740)

protein OCTOPUS-like

protein OCTOPUS

protein OCTOPUS-like

protein OCTOPUS

uncharacterized LOC101243925

UPF0503 protein At3g09070, chloroplastic-like

protein OCTOPUS-like

protein OCTOPUS

uncharacterized LOC100217015

protein OCTOPUS

protein OCTOPUS-like

UPF0503 protein At3g09070, chloroplastic

UPF0503 protein At3g09070, chloroplastic-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	5
sbi04517	IgSF CAM signaling	5
sbi04814	Motor proteins	5

Expression

Expression pattern

Entrez Gene ID^*

107930147

107905645

107958036

818385

820060

831732

103847495

103848299

103865648

106447655

106435870

106439216

100807102

100799446

100263034

100251888

7466049

7487297

25498706

101256822

101243925

102583781

102579926

107782953

107811433

107789019

4338959

4324814

9267710

103630391

103635597

100217015

123079777

123062620

123091739

123448226

123440523

123415280

8060107

8061749

100828984

100842841

104581871

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107899040 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107899040 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	cit
Paralog	4	3	3	2	2	2	2	1	2	2	3	3	3	3	3	2	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107899040 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107899040 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**