ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100803154	regulatory protein RecX
gma-r.7	100803154	regulatory protein RecX
gma-u.5	100783629	regulatory protein RecX
mtr-u.5	11442334	regulatory protein RecX
ppo-u.5	7457646	uncharacterized LOC7457646
ath-u.5	AT3G13226	regulatory protein RecX family protein
bra-r.6	103849756	uncharacterized LOC103849756
vvi-u.5	100251420	uncharacterized LOC100251420
ghi-r.1	107931152	uncharacterized LOC107931152
ghi-r.1	107903420	uncharacterized LOC107903420
bna-r.1	111202410	uncharacterized LOC111202410
bna-r.1	106377525	uncharacterized LOC106377525
cit-r.1	102612264	uncharacterized LOC102612264
sly-u.5	101244505	uncharacterized LOC101244505
sot-r.1	102602812	regulatory protein RecX
nta-r.1	107820300	uncharacterized LOC107820300
nta-r.1	107766517	uncharacterized LOC107766517
osa-u.5	4337332	uncharacterized LOC4337332
zma-u.5	103642174	regulatory protein RecX family protein
tae-r.2	123190929	regulatory protein RecX
tae-r.2	123055075	regulatory protein RecX
tae-r.2	123047277	regulatory protein RecX
hvu-r.1	123428298	regulatory protein RecX
sbi-r.1	8082572	regulatory protein RecX
bdi-r.1	100829966	regulatory protein RecX
cre-r.1	CHLRE_03g204900v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006282 [list] [network] regulation of DNA repair

(17 genes)

IEA

GO CC

GO MF

Protein

XP_003544586.1 [sequence] [blastp]
XP_006595680.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_003544586.1)
chlo 6, chlo_mito 4, nucl 2	(predict for XP_006595680.1)

Subcellular
localization
TargetP

chlo 7	(predict for XP_003544586.1)
chlo 7	(predict for XP_006595680.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100803154	gma-r.7 for 100803154	gma-u.5 for 100783629	mtr-u.5 for 11442334	ppo-u.5 for 7457646	ath-u.5 for AT3G13226	bra-r.6 for 103849756	vvi-u.5 for 100251420	ghi-r.1 for 107931152	ghi-r.1 for 107903420	bna-r.1 for 111202410	bna-r.1 for 106377525	cit-r.1 for 102612264	sly-u.5 for 101244505	sot-r.1 for 102602812	nta-r.1 for 107820300	nta-r.1 for 107766517	osa-u.5 for 4337332	zma-u.5 for 103642174	tae-r.2 for 123190929	tae-r.2 for 123055075	tae-r.2 for 123047277	hvu-r.1 for 123428298	sbi-r.1 for 8082572	bdi-r.1 for 100829966	cre-r.1 for CHLRE_03g204900v5

Ortholog

Ortholog ID: 10078

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

regulatory protein RecX

uncharacterized LOC7457646

regulatory protein RecX family protein

uncharacterized LOC103849756

uncharacterized LOC100251420

uncharacterized LOC107931152

uncharacterized LOC107903420

uncharacterized LOC111202410

uncharacterized LOC106377525

uncharacterized LOC102612264

uncharacterized LOC101244505

regulatory protein RecX

uncharacterized LOC107820300

uncharacterized LOC107766517

uncharacterized LOC4337332

regulatory protein RecX family protein

regulatory protein RecX

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	4
gma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00240	Pyrimidine metabolism	4
mtr01240	Biosynthesis of cofactors	3
mtr01232	Nucleotide metabolism	2
mtr00220	Arginine biosynthesis	2
mtr00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00785	Lipoic acid metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00540	Lipopolysaccharide biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	4
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00230	Purine metabolism	3
tae00564	Glycerophospholipid metabolism	2
tae03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2
sbi00230	Purine metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00230	Purine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100803154

100783629

11442334

7457646

820518

103849756

100251420

107931152

107903420

111202410

106377525

102612264

101244505

102602812

107820300

107766517

4337332

103642174

123190929

123055075

123047277

123428298

8082572

100829966

5718860

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100803154 (gma-u.5 coexpression data)

Top 50 enrichment test to 100803154 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	1	1	1	2	2	1	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100803154 (gma-u.5 coexpression data)

Top 50 enrichment test to 100803154 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**