Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100807592   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 gma-r.7   100807592   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 gma-m.5   100807592   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 gma-u.5   100813684   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 mtr-u.5   11441803   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 cit-r.1   107178497   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 cit-r.1   112495636   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 

close


Top 50 coexpressed genes to 100807592 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100807592 (gma-u.5 coexpression data)

CoexMap"100807592"


gmaLOC100807592 | Entrez gene ID : 100807592      
Species gma mtr cit osa sot sly ath bna ppo ghi bdi sbi bra tae hvu vvi zma cre nta
Paralog 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (45 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (114 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008175 [list] [network] tRNA methyltransferase activity  (27 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein NP_001357276.1 [sequence] [blastp]
XP_006594595.1 [sequence] [blastp]
XP_006594596.1 [sequence] [blastp]
XP_014621293.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2  (predict for NP_001357276.1)
cyto 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_006594595.1)
cyto 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_006594596.1)
chlo 9  (predict for XP_014621293.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001357276.1)
other 8  (predict for XP_006594595.1)
other 8  (predict for XP_006594596.1)
mito 4  (predict for XP_014621293.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100807592
gma-r.7
for
100807592
gma-m.5
for
100807592
gma-u.5
for
100813684
mtr-u.5
for
11441803
cit-r.1
for
107178497
cit-r.1
for
112495636


Ortholog ID: 14121
Species gma gma mtr cit cit
Symbol LOC100807592 LOC100813684 LOC11441803 LOC107178497 LOC112495636
Function* putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100807592 100813684 11441803 107178497 112495636
The preparation time of this page was 0.1 [sec].