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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   107178497   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 cit-r.1   112495636   pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like 
 gma-u.5   100807592   putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase 
 gma-u.5   100813684   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 mtr-u.5   11441803   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 

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Top 50 coexpressed genes to 107178497 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107178497 (cit-r.1 coexpression data)

CoexMap"107178497"


citLOC107178497 | Entrez gene ID : 107178497    
Species cit gma mtr vvi bdi bna ppo sbi ghi hvu sot sly nta osa tae zma cre ath bra
Paralog 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (4772 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052289992.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  cysk 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_052289992.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_052289992.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
107178497
cit-r.1
for
112495636
gma-u.5
for
100807592
gma-u.5
for
100813684
mtr-u.5
for
11441803


Ortholog ID: 14121
Species cit cit gma gma mtr
Symbol LOC107178497 LOC112495636 LOC100807592 LOC100813684 LOC11441803
Function* pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At1g08070, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107178497 112495636 100807592 100813684 11441803
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