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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100808233   protein TIC 55, chloroplastic 
 gma-r.7   100808233   protein TIC 55, chloroplastic 
 gma-u.5   100818625   protein TIC 55, chloroplastic 
 mtr-u.5   11426745   protein TIC 55, chloroplastic 
 ppo-u.5   7489166   protein TIC 55, chloroplastic 
 ppo-u.5   7465437   protein TIC 55, chloroplastic 
 ath-u.5   TIC55-II   translocon at the inner envelope membrane of chloroplasts 55-II 
 vvi-u.5   100259354   protein TIC 55, chloroplastic 
 sly-u.5   101252762   protein TIC 55, chloroplastic 
 osa-u.5   4330982   protein TIC 55, chloroplastic 
 zma-u.5   100382079   Protein TIC 55 chloroplastic 

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Top 50 coexpressed genes to 100808233 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100808233 (gma-u.5 coexpression data)

CoexMap"100808233"


gmaLOC100808233 | Entrez gene ID : 100808233      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045036 [list] [network] protein targeting to chloroplast  (23 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0010277 [list] [network] chlorophyllide a oxygenase activity  (10 genes)  IEA  
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (62 genes)  IEA  
Protein XP_003522345.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  vacu 2,  E.R. 2,  E.R._vacu 2  (predict for XP_003522345.2)
Subcellular
localization
TargetP
mito 6  (predict for XP_003522345.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100808233

.
gma-r.7
for
100808233

.
gma-u.5
for
100818625

.
mtr-u.5
for
11426745

.
ppo-u.5
for
7489166

.
ppo-u.5
for
7465437

.
ath-u.5
for
TIC55-II

.
vvi-u.5
for
100259354

.
sly-u.5
for
101252762

.
osa-u.5
for
4330982

.
zma-u.5
for
100382079

.


Ortholog ID: 9398
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol TIC55-II LOC100808233 LOC100818625 LOC101252762 LOC4330982 LOC100382079 LOC103858361 LOC100259354 LOC7489166 LOC7465437 LOC11426745 LOC123145871 LOC123128736 LOC123406315 LOC107958971 LOC107906810 LOC106388376 LOC106438399 LOC8081972 LOC102605482 LOC102614564 LOC102614849 LOC100823679 LOC107771918 LOC107786854
Function* translocon at the inner envelope membrane of chloroplasts 55-II protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic Protein TIC 55 chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic-like protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00710 Carbon fixation by Calvin cycle 4
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
nta00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817019 100808233 100818625 101252762 4330982 100382079 103858361 100259354 7489166 7465437 11426745 123145871 123128736 123406315 107958971 107906810 106388376 106438399 8081972 102605482 102614564 102614849 100823679 107771918 107786854
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