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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107786854   protein TIC 55, chloroplastic-like 
 nta-r.1   107771918   protein TIC 55, chloroplastic 
 sly-u.5   101252762   protein TIC 55, chloroplastic 
 sot-r.1   102605482   protein TIC 55, chloroplastic 
 ath-u.5   TIC55-II   translocon at the inner envelope membrane of chloroplasts 55-II 
 gma-u.5   100818625   protein TIC 55, chloroplastic 
 gma-u.5   100808233   protein TIC 55, chloroplastic 
 bra-r.6   103858361   protein TIC 55, chloroplastic 
 vvi-u.5   100259354   protein TIC 55, chloroplastic 
 ppo-u.5   7489166   protein TIC 55, chloroplastic 
 ppo-u.5   7465437   protein TIC 55, chloroplastic 
 mtr-u.5   11426745   protein TIC 55, chloroplastic 
 ghi-r.1   107906810   protein TIC 55, chloroplastic 
 ghi-r.1   107958971   protein TIC 55, chloroplastic 
 bna-r.1   106388376   protein TIC 55, chloroplastic 
 bna-r.1   106438399   protein TIC 55, chloroplastic 
 cit-r.1   102614564   protein TIC 55, chloroplastic-like 
 cit-r.1   102614849   protein TIC 55, chloroplastic 
 osa-u.5   4330982   protein TIC 55, chloroplastic 
 zma-u.5   100382079   Protein TIC 55 chloroplastic 
 tae-r.2   123145871   protein TIC 55, chloroplastic 
 tae-r.2   123139021   protein TIC 55, chloroplastic 
 tae-r.2   123128736   protein TIC 55, chloroplastic 
 hvu-r.1   123406315   protein TIC 55, chloroplastic 
 sbi-r.1   8081972   protein TIC 55, chloroplastic 
 bdi-r.1   100823679   protein TIC 55, chloroplastic 

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Top 50 coexpressed genes to 107786854 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107786854 (nta-r.1 coexpression data)

CoexMap"107786854"


ntaLOC107786854 | Entrez gene ID : 107786854    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 1 1 2 1 2 2 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045036 [list] [network] protein targeting to chloroplast  (14 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1165 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0010277 [list] [network] chlorophyllide a oxygenase activity  (10 genes)  IEA  
GO:0051537 [list] [network] 2 iron, 2 sulfur cluster binding  (69 genes)  IEA  
Protein XP_016463838.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  chlo 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for XP_016463838.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016463838.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107786854
nta-r.1
for
107771918
sly-u.5
for
101252762
sot-r.1
for
102605482
ath-u.5
for
TIC55-II
gma-u.5
for
100818625
gma-u.5
for
100808233
bra-r.6
for
103858361
vvi-u.5
for
100259354
ppo-u.5
for
7489166
ppo-u.5
for
7465437
mtr-u.5
for
11426745
ghi-r.1
for
107906810
ghi-r.1
for
107958971
bna-r.1
for
106388376
bna-r.1
for
106438399
cit-r.1
for
102614564
cit-r.1
for
102614849
osa-u.5
for
4330982
zma-u.5
for
100382079
tae-r.2
for
123145871
tae-r.2
for
123139021
tae-r.2
for
123128736
hvu-r.1
for
123406315
sbi-r.1
for
8081972
bdi-r.1
for
100823679


Ortholog ID: 9398
Species nta nta sly sot ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107786854 LOC107771918 LOC101252762 LOC102605482 TIC55-II LOC100818625 LOC100808233 LOC103858361 LOC100259354 LOC7489166 LOC7465437 LOC11426745 LOC107906810 LOC107958971 LOC106388376 LOC106438399 LOC102614564 LOC102614849 LOC4330982 LOC100382079 LOC123145871 LOC123139021 LOC123128736 LOC123406315 LOC8081972 LOC100823679
Function* protein TIC 55, chloroplastic-like protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic translocon at the inner envelope membrane of chloroplasts 55-II protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic-like protein TIC 55, chloroplastic protein TIC 55, chloroplastic Protein TIC 55 chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic protein TIC 55, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 3
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 6
sly00710 Carbon fixation by Calvin cycle 4
sly00260 Glycine, serine and threonine metabolism 2
sly00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo00190 Oxidative phosphorylation 2
ppo00195 Photosynthesis 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 4
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107786854 107771918 101252762 102605482 817019 100818625 100808233 103858361 100259354 7489166 7465437 11426745 107906810 107958971 106388376 106438399 102614564 102614849 4330982 100382079 123145871 123139021 123128736 123406315 8081972 100823679
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