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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816100   probable LRR receptor-like serine/threonine-protein kinase At2g16250 
 gma-r.7   100816100   probable LRR receptor-like serine/threonine-protein kinase At2g16250 
 gma-u.5   102664301   putative pentatricopeptide repeat-containing protein At1g16830 
 gma-u.5   100797548   putative pentatricopeptide repeat-containing protein At1g16830 
 mtr-u.5   11445878   putative pentatricopeptide repeat-containing protein At1g16830 
 ath-u.5   AT1G16830   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103872468   putative pentatricopeptide repeat-containing protein At1g16830 
 vvi-u.5   100258221   putative pentatricopeptide repeat-containing protein At1g16830 
 ghi-r.1   107962207   putative pentatricopeptide repeat-containing protein At1g16830 
 bna-r.1   106365581   putative pentatricopeptide repeat-containing protein At1g16830 
 bna-r.1   106346746   putative pentatricopeptide repeat-containing protein At1g16830 
 cit-r.1   102630575   putative pentatricopeptide repeat-containing protein At1g16830 
 cit-r.1   127898592   putative pentatricopeptide repeat-containing protein At1g16830 
 sly-u.5   101247460   putative pentatricopeptide repeat-containing protein At1g16830 
 sot-r.1   102594091   putative pentatricopeptide repeat-containing protein At1g16830 
 nta-r.1   107780716   uncharacterized LOC107780716 
 zma-u.5   103644840   putative pentatricopeptide repeat-containing protein 
 hvu-r.1   123436642   putative pentatricopeptide repeat-containing protein At1g16830 
 sbi-r.1   8055127   putative pentatricopeptide repeat-containing protein At1g16830 
 bdi-r.1   100840948   putative pentatricopeptide repeat-containing protein At1g16830 

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Top 50 coexpressed genes to 100816100 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816100 (gma-u.5 coexpression data)

CoexMap"100816100"


gmaLOC100816100 | Entrez gene ID : 100816100    
Species gma mtr ath bra vvi ghi bna cit sly sot nta zma hvu sbi bdi osa tae cre ppo
Paralog 4 1 1 1 1 1 2 2 1 1 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042791 [list] [network] 5S class rRNA transcription by RNA polymerase III  (6 genes)  IEA  
GO:0006384 [list] [network] transcription initiation at RNA polymerase III promoter  (21 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (13 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_040868764.1 [sequence] [blastp]
XP_040868765.1 [sequence] [blastp]
XP_040868766.1 [sequence] [blastp]
XP_040868767.1 [sequence] [blastp]
XP_040868768.1 [sequence] [blastp]
XP_040868769.1 [sequence] [blastp]
XP_040868770.1 [sequence] [blastp]
XP_040868771.1 [sequence] [blastp]
XP_040868772.1 [sequence] [blastp]
XP_040868773.1 [sequence] [blastp]
XP_040868774.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868764.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868765.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868766.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868767.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868768.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868769.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868770.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868771.1)
mito 6,  cyto_mito 4,  chlo 2  (predict for XP_040868772.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_040868773.1)
chlo 4,  plas 1,  nucl 1,  extr 1,  E.R._plas 1,  cyto 1,  mito 1,  cysk_nucl 1  (predict for XP_040868774.1)
Subcellular
localization
TargetP
mito 6,  chlo 6  (predict for XP_040868764.1)
mito 6,  chlo 6  (predict for XP_040868765.1)
mito 6,  chlo 6  (predict for XP_040868766.1)
mito 6,  chlo 6  (predict for XP_040868767.1)
mito 6,  chlo 6  (predict for XP_040868768.1)
mito 6,  chlo 6  (predict for XP_040868769.1)
mito 6,  chlo 6  (predict for XP_040868770.1)
mito 6,  chlo 6  (predict for XP_040868771.1)
mito 6,  chlo 6  (predict for XP_040868772.1)
scret 8,  other 4  (predict for XP_040868773.1)
other 6,  chlo 3  (predict for XP_040868774.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816100
gma-r.7
for
100816100
gma-u.5
for
102664301
gma-u.5
for
100797548
mtr-u.5
for
11445878
ath-u.5
for
AT1G16830
bra-r.6
for
103872468
vvi-u.5
for
100258221
ghi-r.1
for
107962207
bna-r.1
for
106365581
bna-r.1
for
106346746
cit-r.1
for
102630575
cit-r.1
for
127898592
sly-u.5
for
101247460
sot-r.1
for
102594091
nta-r.1
for
107780716
zma-u.5
for
103644840
hvu-r.1
for
123436642
sbi-r.1
for
8055127
bdi-r.1
for
100840948


Ortholog ID: 11470
Species gma gma gma mtr ath bra vvi ghi bna bna cit cit sly sot nta zma hvu sbi bdi
Symbol LOC100816100 LOC102664301 LOC100797548 LOC11445878 AT1G16830 LOC103872468 LOC100258221 LOC107962207 LOC106365581 LOC106346746 LOC102630575 LOC127898592 LOC101247460 LOC102594091 LOC107780716 LOC103644840 LOC123436642 LOC8055127 LOC100840948
Function* probable LRR receptor-like serine/threonine-protein kinase At2g16250 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 uncharacterized LOC107780716 putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03250 Viral life cycle - HIV-1 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03020 RNA polymerase 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100816100 102664301 100797548 11445878 838254 103872468 100258221 107962207 106365581 106346746 102630575 127898592 101247460 102594091 107780716 103644840 123436642 8055127 100840948
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