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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   127898592   putative pentatricopeptide repeat-containing protein At1g16830 
 ath-u.5   AT1G16830   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   102664301   putative pentatricopeptide repeat-containing protein At1g16830 
 gma-u.5   100797548   putative pentatricopeptide repeat-containing protein At1g16830 
 gma-u.5   100816100   probable LRR receptor-like serine/threonine-protein kinase At2g16250 
 vvi-u.5   100258221   putative pentatricopeptide repeat-containing protein At1g16830 
 mtr-u.5   11445878   putative pentatricopeptide repeat-containing protein At1g16830 
 sly-u.5   101247460   putative pentatricopeptide repeat-containing protein At1g16830 
 zma-u.5   103644840   putative pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 127898592 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 127898592 (cit-r.1 coexpression data)

CoexMap"127898592"


citLOC127898592 | Entrez gene ID : 127898592    
Species cit ath gma vvi mtr sly zma bdi hvu bra bna ppo sbi ghi osa sot nta cre tae
Paralog 1 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052287565.1 [sequence] [blastp]
XP_052287566.1 [sequence] [blastp]
XP_052287567.1 [sequence] [blastp]
XP_052287568.1 [sequence] [blastp]
XP_052287569.1 [sequence] [blastp]
XP_052287570.1 [sequence] [blastp]
XP_052287571.1 [sequence] [blastp]
XP_052287572.1 [sequence] [blastp]
XP_052287573.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287565.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287566.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287567.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287568.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287569.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287570.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287571.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287572.1)
chlo_mito 4,  chlo 4,  mito 4,  cyto_mito 2,  cyto 2  (predict for XP_052287573.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_052287565.1)
mito 9  (predict for XP_052287566.1)
mito 9  (predict for XP_052287567.1)
mito 9  (predict for XP_052287568.1)
mito 9  (predict for XP_052287569.1)
mito 9  (predict for XP_052287570.1)
mito 9  (predict for XP_052287571.1)
mito 9  (predict for XP_052287572.1)
mito 9  (predict for XP_052287573.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
127898592
ath-u.5
for
AT1G16830
gma-u.5
for
102664301
gma-u.5
for
100797548
gma-u.5
for
100816100
vvi-u.5
for
100258221
mtr-u.5
for
11445878
sly-u.5
for
101247460
zma-u.5
for
103644840


Ortholog ID: 11470
Species cit cit ath bra ghi bna bna gma gma vvi mtr sly sot nta zma hvu sbi bdi
Symbol LOC102630575 LOC127898592 AT1G16830 LOC103872468 LOC107962207 LOC106365581 LOC106346746 LOC100797548 LOC102664301 LOC100258221 LOC11445878 LOC101247460 LOC102594091 LOC107780716 LOC103644840 LOC123436642 LOC8055127 LOC100840948
Function* putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 uncharacterized LOC107780716 putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830 putative pentatricopeptide repeat-containing protein At1g16830
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
mtr03020 RNA polymerase 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102630575 127898592 838254 103872468 107962207 106365581 106346746 100797548 102664301 100258221 11445878 101247460 102594091 107780716 103644840 123436642 8055127 100840948
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