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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100819035  nucleolin 
 gma-r.7  100819035  nucleolin 
 gma-m.5  100819035  nucleolin 
 gma-u.5  100784338  nucleolin 
 mtr-u.5  11411325  nucleolin 
 ppo-u.5  7480172  uncharacterized LOC7480172 
 ppo-u.5  18099217  uncharacterized LOC18099217 
 vvi-u.5  100259067  uncharacterized LOC100259067 
 ghi-r.1  107911059  nucleolin 
 ghi-r.1  107912795  heterogeneous nuclear ribonucleoprotein Q 
 cit-r.1  102612409  heterogeneous nuclear ribonucleoprotein Q-like 
 sly-u.5  101250077  uncharacterized LOC101250077 
 sot-r.1  102579421  nucleolin-like 
 nta-r.1  107824244  heterogeneous nuclear ribonucleoprotein Q 
 nta-r.1  107780308  uncharacterized LOC107780308 
 nta-r.1  142171542  uncharacterized LOC142171542 
 tae-r.2  123114516  nucleolin 
 tae-r.2  123155673  nucleolin 
 hvu-r.1  123395275  nucleolin-like 
 bdi-r.1  100837927  heterogeneous nuclear ribonucleoprotein Q 

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Top 50 coexpressed genes to 100819035 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819035 (gma-u.5 coexpression data)

CoexMap"100819035"


gmaLOC100819035 | Entrez gene ID : 100819035
Species gma mtr ppo vvi ghi cit sly sot nta tae hvu bdi cre bra ath bna osa zma sbi
Paralog 4 1 2 1 2 1 1 1 3 2 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003548856.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  chlo 2,  nucl 2  (predict for XP_003548856.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003548856.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100819035


gma-r.7
for
100819035


gma-m.5
for
100819035


gma-u.5
for
100784338


mtr-u.5
for
11411325


ppo-u.5
for
7480172


ppo-u.5
for
18099217


vvi-u.5
for
100259067


ghi-r.1
for
107911059


ghi-r.1
for
107912795


cit-r.1
for
102612409


sly-u.5
for
101250077


sot-r.1
for
102579421


nta-r.1
for
107824244


nta-r.1
for
107780308


nta-r.1
for
142171542


tae-r.2
for
123114516


tae-r.2
for
123155673


hvu-r.1
for
123395275


bdi-r.1
for
100837927



Ortholog ID: 12332
Species gma gma mtr ppo ppo vvi ghi ghi cit sly sot nta nta nta tae tae hvu bdi
Symbol LOC100819035 LOC100784338 LOC11411325 LOC7480172 LOC18099217 LOC100259067 LOC107911059 LOC107912795 LOC102612409 LOC101250077 LOC102579421 LOC107824244 LOC107780308 LOC142171542 LOC123114516 LOC123124009 LOC123395275 LOC100837927
Function* nucleolin nucleolin nucleolin uncharacterized LOC7480172 uncharacterized LOC18099217 uncharacterized LOC100259067 nucleolin heterogeneous nuclear ribonucleoprotein Q heterogeneous nuclear ribonucleoprotein Q-like uncharacterized LOC101250077 nucleolin-like heterogeneous nuclear ribonucleoprotein Q uncharacterized LOC107780308 uncharacterized LOC142171542 nucleolin nucleolin nucleolin-like heterogeneous nuclear ribonucleoprotein Q
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819035 100784338 11411325 7480172 18099217 100259067 107911059 107912795 102612409 101250077 102579421 107824244 107780308 142171542 123114516 123124009 123395275 100837927
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