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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   PURD   phosphoribosylamine--glycine ligase 
 gma-r.7   PURD   phosphoribosylamine--glycine ligase 
 gma-m.5   PURD   phosphoribosylamine--glycine ligase 
 ppo-u.5   18098330   phosphoribosylamine--glycine ligase 
 ath-u.5   PUR2   Glycinamide ribonucleotide (GAR) synthetase 
 bra-r.6   103836307   phosphoribosylamine--glycine ligase, chloroplastic 
 bra-r.6   103871761   phosphoribosylamine--glycine ligase, chloroplastic 
 vvi-u.5   100252684   phosphoribosylamine--glycine ligase 
 ghi-r.1   107925438   phosphoribosylamine--glycine ligase 
 ghi-r.1   107928244   phosphoribosylamine--glycine ligase 
 ghi-r.1   107945191   phosphoribosylamine--glycine ligase 
 bna-r.1   106346239   phosphoribosylamine--glycine ligase, chloroplastic-like 
 bna-r.1   106362382   phosphoribosylamine--glycine ligase, chloroplastic 
 bna-r.1   106401586   phosphoribosylamine--glycine ligase, chloroplastic 
 cit-r.1   102615577   phosphoribosylamine--glycine ligase 
 sly-u.5   101265372   phosphoribosylamine--glycine ligase 
 sot-r.1   102587923   phosphoribosylamine--glycine ligase 
 nta-r.1   107830634   phosphoribosylamine--glycine ligase-like 
 nta-r.1   107819621   phosphoribosylamine--glycine ligase-like 
 osa-u.5   4351721   phosphoribosylamine--glycine ligase 
 osa-u.5   4344854   phosphoribosylamine--glycine ligase 
 zma-u.5   100383422   phosphoribosylamine--glycine ligase 
 zma-u.5   100281518   phosphoribosylamine--glycine ligase 
 tae-r.2   123088148   phosphoribosylamine--glycine ligase 
 tae-r.2   123093518   phosphoribosylamine--glycine ligase, chloroplastic 
 tae-r.2   123098793   phosphoribosylamine--glycine ligase 
 hvu-r.1   123449715   phosphoribosylamine--glycine ligase 
 sbi-r.1   8057177   phosphoribosylamine--glycine ligase 
 sbi-r.1   8068993   phosphoribosylamine--glycine ligase 
 sbi-r.1   110437693   phosphoribosylamine--glycine ligase-like 
 bdi-r.1   100830252   phosphoribosylamine--glycine ligase 
 bdi-r.1   100839999   phosphoribosylamine--glycine ligase 
 cre-r.1   CHLRE_09g404903v5   uncharacterized protein 
 cre-r.1   CHLRE_18g749647v5   uncharacterized protein 
 cre-r.1   CHLRE_18g749497v5   uncharacterized protein 

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Top 50 coexpressed genes to PURD (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PURD (gma-u.5 coexpression data)

CoexMap"547987"


gmaPURD | Entrez gene ID : 547987      
Species gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre mtr
Paralog 3 1 1 2 1 3 3 1 1 1 2 2 2 3 1 3 2 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00230 [list] [network] Purine metabolism (174 genes)
GO BP
GO:0009113 [list] [network] purine nucleobase biosynthetic process  (19 genes)  IEA  
GO CC
GO MF
GO:0004637 [list] [network] phosphoribosylamine-glycine ligase activity  (3 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3089 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein NP_001242479.2 [sequence] [blastp]
XP_025979758.1 [sequence] [blastp]
XP_040861573.1 [sequence] [blastp]
XP_040861574.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001242479.2)
chlo 10  (predict for XP_025979758.1)
chlo 10  (predict for XP_040861573.1)
chlo 10  (predict for XP_040861574.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001242479.2)
chlo 8  (predict for XP_025979758.1)
chlo 8  (predict for XP_040861573.1)
chlo 8  (predict for XP_040861574.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
PURD
gma-r.7
for
PURD
gma-m.5
for
PURD
ppo-u.5
for
18098330
ath-u.5
for
PUR2
bra-r.6
for
103836307
bra-r.6
for
103871761
vvi-u.5
for
100252684
ghi-r.1
for
107925438
ghi-r.1
for
107928244
ghi-r.1
for
107945191
bna-r.1
for
106346239
bna-r.1
for
106362382
bna-r.1
for
106401586
cit-r.1
for
102615577
sly-u.5
for
101265372
sot-r.1
for
102587923
nta-r.1
for
107830634
nta-r.1
for
107819621
osa-u.5
for
4351721
osa-u.5
for
4344854
zma-u.5
for
100383422
zma-u.5
for
100281518
tae-r.2
for
123088148
tae-r.2
for
123093518
tae-r.2
for
123098793
hvu-r.1
for
123449715
sbi-r.1
for
8057177
sbi-r.1
for
8068993
sbi-r.1
for
110437693
bdi-r.1
for
100830252
bdi-r.1
for
100839999
cre-r.1
for
CHLRE_09g404903v5
cre-r.1
for
CHLRE_18g749647v5
cre-r.1
for
CHLRE_18g749497v5


Ortholog ID: 6122
Species gma ppo ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma tae tae tae hvu sbi sbi sbi bdi bdi cre cre cre
Symbol PURD LOC18098330 PUR2 LOC103836307 LOC103871761 LOC100252684 LOC107925438 LOC107928244 LOC107945191 LOC106346239 LOC106362382 LOC106401586 LOC102615577 LOC101265372 LOC102587923 LOC107830634 LOC107819621 LOC4351721 LOC4344854 LOC100383422 LOC100281518 LOC123088148 LOC123093518 LOC123098793 LOC123449715 LOC8057177 LOC8068993 LOC110437693 LOC100830252 LOC100839999 CHLRE_09g404903v5 CHLRE_18g749647v5 CHLRE_18g749497v5
Function* phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase Glycinamide ribonucleotide (GAR) synthetase phosphoribosylamine--glycine ligase, chloroplastic phosphoribosylamine--glycine ligase, chloroplastic phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase, chloroplastic-like phosphoribosylamine--glycine ligase, chloroplastic phosphoribosylamine--glycine ligase, chloroplastic phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase-like phosphoribosylamine--glycine ligase-like phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase, chloroplastic phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase-like phosphoribosylamine--glycine ligase phosphoribosylamine--glycine ligase uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 8
gma01240 Biosynthesis of cofactors 4
gma01232 Nucleotide metabolism 3
gma00240 Pyrimidine metabolism 3
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 9
ath00300 Lysine biosynthesis 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath00230 Purine metabolism 3
ath00290 Valine, leucine and isoleucine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 4
bra00230 Purine metabolism 3
bra00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra00230 Purine metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 7
ghi00071 Fatty acid degradation 6
ghi00350 Tyrosine metabolism 6
ghi00592 alpha-Linolenic acid metabolism 6
ghi00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 6
ghi01232 Nucleotide metabolism 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 6
ghi01232 Nucleotide metabolism 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
sot00230 Purine metabolism 2
sot00260 Glycine, serine and threonine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 4
osa00030 Pentose phosphate pathway 3
osa00051 Fructose and mannose metabolism 3
osa00330 Arginine and proline metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 6
osa00220 Arginine biosynthesis 5
osa01230 Biosynthesis of amino acids 5
osa01240 Biosynthesis of cofactors 4
osa00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 9
zma00340 Histidine metabolism 5
zma00270 Cysteine and methionine metabolism 3
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 2
zma00230 Purine metabolism 2
zma00340 Histidine metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae00230 Purine metabolism 5
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 6
tae03013 Nucleocytoplasmic transport 5
tae00300 Lysine biosynthesis 4
tae01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 10
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 5
sbi03010 Ribosome 5
sbi00010 Glycolysis / Gluconeogenesis 4
sbi01200 Carbon metabolism 4
sbi00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00230 Purine metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 7
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi00071 Fatty acid degradation 3
sbi00350 Tyrosine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 6
bdi01240 Biosynthesis of cofactors 3
bdi01232 Nucleotide metabolism 2
bdi03010 Ribosome 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 6
bdi03018 RNA degradation 3
bdi01240 Biosynthesis of cofactors 3
bdi03010 Ribosome 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01210 2-Oxocarboxylic acid metabolism 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 5
cre00220 Arginine biosynthesis 4
cre01210 2-Oxocarboxylic acid metabolism 3
cre00230 Purine metabolism 3
cre00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 4
cre00220 Arginine biosynthesis 3
cre01230 Biosynthesis of amino acids 3
cre00250 Alanine, aspartate and glutamate metabolism 2
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 547987 18098330 837515 103836307 103871761 100252684 107925438 107928244 107945191 106346239 106362382 106401586 102615577 101265372 102587923 107830634 107819621 4351721 4344854 100383422 100281518 123088148 123093518 123098793 123449715 8057177 8068993 110437693 100830252 100839999 66054837 5720809 5720806
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