Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-m.5   11417028   pentatricopeptide repeat-containing protein At1g62930, chloroplastic 
 mtr-u.5   11417028   pentatricopeptide repeat-containing protein At1g62930, chloroplastic 
 mtr-r.5   11417028   pentatricopeptide repeat-containing protein At1g62930, chloroplastic 
 gma-u.5   100783041   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100244236   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100246659   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100256928   pentatricopeptide repeat-containing protein At1g62910 
 ghi-r.1   107952804   uncharacterized LOC107952804 
 ghi-r.1   107945374   uncharacterized LOC107945374 
 ghi-r.1   107934649   peroxisomal (S)-2-hydroxy-acid oxidase GLO5 

close


Top 50 coexpressed genes to 11417028 (mtr-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11417028 (mtr-m.5 coexpression data)

CoexMap"11417028"


mtrLOC11417028 | Entrez gene ID : 11417028    
Species mtr gma vvi ghi sbi osa sot sly cit bra tae ath bna hvu ppo zma cre nta bdi
Paralog 3 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013447397.1 [sequence] [blastp]
XP_024629005.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_013447397.1)
extr 5,  E.R. 2,  chlo 1,  nucl 1,  cyto 1,  golg 1,  cyto_nucl 1  (predict for XP_024629005.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_013447397.1)
scret 7,  other 4  (predict for XP_024629005.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-m.5
for
11417028
mtr-u.5
for
11417028
mtr-r.5
for
11417028
gma-u.5
for
100783041
vvi-u.5
for
100244236
vvi-u.5
for
100246659
vvi-u.5
for
100256928
ghi-r.1
for
107952804
ghi-r.1
for
107945374
ghi-r.1
for
107934649


Ortholog ID: 13636
Species mtr gma vvi vvi vvi ghi ghi ghi
Symbol LOC11417028 LOC100783041 LOC100244236 LOC100246659 LOC100256928 LOC107912806 LOC107909983 LOC107891770
Function* pentatricopeptide repeat-containing protein At1g62930, chloroplastic putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial pentatricopeptide repeat-containing protein At1g62910 (S)-2-hydroxy-acid oxidase GLO1 uncharacterized LOC107909983 valine--tRNA ligase, chloroplastic/mitochondrial 2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11417028 100783041 100244236 100246659 100256928 107912806 107909983 107891770
The preparation time of this page was 0.2 [sec].