Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   100246659   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-r.5   100246659   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100244236   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 vvi-u.5   100256928   pentatricopeptide repeat-containing protein At1g62910 
 gma-u.5   100783041   putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial 
 mtr-u.5   11417028   pentatricopeptide repeat-containing protein At1g62930, chloroplastic 
 ghi-r.1   107952804   uncharacterized LOC107952804 
 ghi-r.1   107945374   uncharacterized LOC107945374 
 ghi-r.1   107934649   peroxisomal (S)-2-hydroxy-acid oxidase GLO5 

close


Top 50 coexpressed genes to 100246659 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100246659 (vvi-u.5 coexpression data)

CoexMap"100246659"


vviLOC100246659 | Entrez gene ID : 100246659    
Species vvi gma mtr ghi bra sot zma cre ppo sbi sly cit ath nta tae bna osa hvu bdi
Paralog 4 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_003633686.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1,  E.R. 1  (predict for XP_003633686.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_003633686.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
100246659
vvi-r.5
for
100246659
vvi-u.5
for
100244236
vvi-u.5
for
100256928
gma-u.5
for
100783041
mtr-u.5
for
11417028
ghi-r.1
for
107952804
ghi-r.1
for
107945374
ghi-r.1
for
107934649


Ortholog ID: 13636
Species vvi vvi vvi gma mtr ghi ghi ghi
Symbol LOC100246659 LOC100244236 LOC100256928 LOC100783041 LOC11417028 LOC107912806 LOC107909983 LOC107891770
Function* putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial pentatricopeptide repeat-containing protein At1g62910 putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial pentatricopeptide repeat-containing protein At1g62930, chloroplastic (S)-2-hydroxy-acid oxidase GLO1 uncharacterized LOC107909983 valine--tRNA ligase, chloroplastic/mitochondrial 2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100246659 100244236 100256928 100783041 11417028 107912806 107909983 107891770
The preparation time of this page was 0.1 [sec].