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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-r.5   11415559   pentatricopeptide repeat-containing protein At1g31790 
 mtr-u.5   11415559   pentatricopeptide repeat-containing protein At1g31790 
 mtr-m.5   11415559   pentatricopeptide repeat-containing protein At1g31790 
 gma-u.5   100778405   pentatricopeptide repeat-containing protein At1g31790 
 ath-u.5   AT1G31790   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103868930   pentatricopeptide repeat-containing protein At1g31790 
 vvi-u.5   100852499   pentatricopeptide repeat-containing protein At1g31790 
 ghi-r.1   107956065   pentatricopeptide repeat-containing protein At1g31790 
 ghi-r.1   107955897   pentatricopeptide repeat-containing protein At1g31790 
 cit-r.1   107177735   pentatricopeptide repeat-containing protein At1g31790 
 sly-u.5   101244983   pentatricopeptide repeat-containing protein 
 nta-r.1   107823576   pentatricopeptide repeat-containing protein At1g31790-like 
 nta-r.1   107761971   pentatricopeptide repeat-containing protein At1g31790-like 
 osa-u.5   4342822   pentatricopeptide repeat-containing protein At1g31790 
 zma-u.5   100192712   Pentatricopeptide repeat-containing protein 
 hvu-r.1   123399367   pentatricopeptide repeat-containing protein At1g31790 
 bdi-r.1   100844198   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 

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Top 50 coexpressed genes to 11415559 (mtr-r.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11415559 (mtr-r.5 coexpression data)

CoexMap"11415559"


mtrLOC11415559 | Entrez gene ID : 11415559      
Species mtr gma ath bra vvi ghi cit sly nta osa zma hvu bdi sbi sot tae bna ppo cre
Paralog 3 1 1 1 1 2 1 1 2 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003612457.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  chlo 1,  mito 1,  chlo_mito 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_003612457.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003612457.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-r.5
for
11415559
mtr-u.5
for
11415559
mtr-m.5
for
11415559
gma-u.5
for
100778405
ath-u.5
for
AT1G31790
bra-r.6
for
103868930
vvi-u.5
for
100852499
ghi-r.1
for
107956065
ghi-r.1
for
107955897
cit-r.1
for
107177735
sly-u.5
for
101244983
nta-r.1
for
107823576
nta-r.1
for
107761971
osa-u.5
for
4342822
zma-u.5
for
100192712
hvu-r.1
for
123399367
bdi-r.1
for
100844198


Ortholog ID: 11784
Species mtr gma ath bra vvi ghi ghi cit sly nta nta osa zma hvu bdi
Symbol LOC11415559 LOC100778405 AT1G31790 LOC103868930 LOC100852499 LOC107956065 LOC107955897 LOC107177735 LOC101244983 LOC107823576 LOC107761971 LOC4342822 LOC100192712 LOC123399367 LOC100844198
Function* pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g31790-like pentatricopeptide repeat-containing protein At1g31790-like pentatricopeptide repeat-containing protein At1g31790 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At4g18520, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11415559 100778405 840066 103868930 100852499 107956065 107955897 107177735 101244983 107823576 107761971 4342822 100192712 123399367 100844198
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