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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100192712   Pentatricopeptide repeat-containing protein 
 zma-r.6   100192712   Pentatricopeptide repeat-containing protein 
 osa-u.5   4342822   pentatricopeptide repeat-containing protein At1g31790 
 hvu-r.1   123399367   pentatricopeptide repeat-containing protein At1g31790 
 bdi-r.1   100844198   pentatricopeptide repeat-containing protein At4g18520, chloroplastic 
 ath-u.5   AT1G31790   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100778405   pentatricopeptide repeat-containing protein At1g31790 
 sly-u.5   101244983   pentatricopeptide repeat-containing protein 
 bra-r.6   103868930   pentatricopeptide repeat-containing protein At1g31790 
 vvi-u.5   100852499   pentatricopeptide repeat-containing protein At1g31790 
 mtr-u.5   11415559   pentatricopeptide repeat-containing protein At1g31790 
 ghi-r.1   107956065   pentatricopeptide repeat-containing protein At1g31790 
 ghi-r.1   107955897   pentatricopeptide repeat-containing protein At1g31790 
 cit-r.1   107177735   pentatricopeptide repeat-containing protein At1g31790 
 nta-r.1   107823576   pentatricopeptide repeat-containing protein At1g31790-like 
 nta-r.1   107761971   pentatricopeptide repeat-containing protein At1g31790-like 

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Top 50 coexpressed genes to 100192712 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100192712 (zma-u.5 coexpression data)

CoexMap"100192712"


zmaLOC100192712 | Entrez gene ID : 100192712      
Species zma osa hvu bdi ath gma sly bra vvi mtr ghi cit nta sot ppo tae sbi cre bna
Paralog 2 1 1 1 1 1 1 1 1 1 2 1 2 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001131386.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 7,  chlo 3  (predict for NP_001131386.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for NP_001131386.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100192712
zma-r.6
for
100192712
osa-u.5
for
4342822
hvu-r.1
for
123399367
bdi-r.1
for
100844198
ath-u.5
for
AT1G31790
gma-u.5
for
100778405
sly-u.5
for
101244983
bra-r.6
for
103868930
vvi-u.5
for
100852499
mtr-u.5
for
11415559
ghi-r.1
for
107956065
ghi-r.1
for
107955897
cit-r.1
for
107177735
nta-r.1
for
107823576
nta-r.1
for
107761971


Ortholog ID: 11784
Species zma osa hvu bdi ath gma sly bra vvi mtr ghi ghi cit nta nta
Symbol LOC100192712 LOC4342822 LOC123399367 LOC100844198 AT1G31790 LOC100778405 LOC101244983 LOC103868930 LOC100852499 LOC11415559 LOC107956065 LOC107955897 LOC107177735 LOC107823576 LOC107761971
Function* Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At4g18520, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790 pentatricopeptide repeat-containing protein At1g31790-like pentatricopeptide repeat-containing protein At1g31790-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100192712 4342822 123399367 100844198 840066 100778405 101244983 103868930 100852499 11415559 107956065 107955897 107177735 107823576 107761971
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