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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11420409   putative pentatricopeptide repeat-containing protein At3g01580 
 mtr-r.5   11420409   putative pentatricopeptide repeat-containing protein At3g01580 
 mtr-m.5   11420409   putative pentatricopeptide repeat-containing protein At3g01580 
 mtr-u.5   25500904   putative pentatricopeptide repeat-containing protein At3g01580 
 gma-u.5   100802611   putative pentatricopeptide repeat-containing protein At3g01580 
 gma-u.5   100806858   putative pentatricopeptide repeat-containing protein At3g01580 
 ath-u.5   AT3G01580   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   104877337   putative pentatricopeptide repeat-containing protein At3g01580 
 sly-u.5   101266187   putative pentatricopeptide repeat-containing protein At3g01580 
 zma-u.5   103653970   putative pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 11420409 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11420409 (mtr-u.5 coexpression data)

CoexMap"11420409"


mtrLOC11420409 | Entrez gene ID : 11420409      
Species mtr gma ath vvi sly zma sot hvu tae cit sbi ppo ghi cre bna nta bdi bra osa
Paralog 4 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5207 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003604673.2 [sequence] [blastp]
XP_024638570.1 [sequence] [blastp]
XP_024638571.1 [sequence] [blastp]
XP_024638572.1 [sequence] [blastp]
XP_039689476.1 [sequence] [blastp]
XP_039689477.1 [sequence] [blastp]
XP_039689478.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_003604673.2)
cyto 5,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024638570.1)
cyto 5,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024638571.1)
cyto 5,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024638572.1)
cyto 5,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_039689476.1)
E.R. 4,  E.R._vacu 3,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_039689477.1)
E.R. 4,  E.R._vacu 3,  cyto 2,  plas 1,  cyto_nucl 1  (predict for XP_039689478.1)
Subcellular
localization
TargetP
other 4,  scret 4  (predict for XP_003604673.2)
other 4,  scret 4  (predict for XP_024638570.1)
other 4,  scret 4  (predict for XP_024638571.1)
other 4,  scret 4  (predict for XP_024638572.1)
other 4,  scret 4  (predict for XP_039689476.1)
other 8  (predict for XP_039689477.1)
other 8  (predict for XP_039689478.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11420409

.
mtr-r.5
for
11420409

.
mtr-m.5
for
11420409

.
mtr-u.5
for
25500904

.
gma-u.5
for
100802611

.
gma-u.5
for
100806858

.
ath-u.5
for
AT3G01580

.
vvi-u.5
for
104877337

.
sly-u.5
for
101266187

.
zma-u.5
for
103653970

.


Ortholog ID: 11959
Species ath gma gma sly zma vvi mtr mtr hvu ghi ghi sbi sot bdi nta nta
Symbol AT3G01580 LOC100802611 LOC100806858 LOC101266187 LOC103653970 LOC104877337 LOC25500904 LOC11420409 LOC123402078 LOC107892334 LOC107892369 LOC8073852 LOC102580544 LOC100839009 LOC107824666 LOC107795660
Function* Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821107 100802611 100806858 101266187 103653970 104877337 25500904 11420409 123402078 107892334 107892369 8073852 102580544 100839009 107824666 107795660
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