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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103653970   putative pentatricopeptide repeat-containing protein 
 zma-r.6   103653970   putative pentatricopeptide repeat-containing protein 
 sbi-r.1   8073852   putative pentatricopeptide repeat-containing protein At3g01580 
 hvu-r.1   123402078   putative pentatricopeptide repeat-containing protein At3g01580 
 bdi-r.1   100839009   putative pentatricopeptide repeat-containing protein At3g01580 
 ath-u.5   AT3G01580   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100802611   putative pentatricopeptide repeat-containing protein At3g01580 
 gma-u.5   100806858   putative pentatricopeptide repeat-containing protein At3g01580 
 sly-u.5   101266187   putative pentatricopeptide repeat-containing protein At3g01580 
 vvi-u.5   104877337   putative pentatricopeptide repeat-containing protein At3g01580 
 mtr-u.5   25500904   putative pentatricopeptide repeat-containing protein At3g01580 
 mtr-u.5   11420409   putative pentatricopeptide repeat-containing protein At3g01580 
 ghi-r.1   107892334   putative pentatricopeptide repeat-containing protein At3g01580 
 ghi-r.1   107892369   putative pentatricopeptide repeat-containing protein At3g01580 
 sot-r.1   102580544   putative pentatricopeptide repeat-containing protein At3g01580 
 nta-r.1   107824666   putative pentatricopeptide repeat-containing protein At3g01580 
 nta-r.1   107795660   putative pentatricopeptide repeat-containing protein At3g01580 

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Top 50 coexpressed genes to 103653970 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103653970 (zma-u.5 coexpression data)

CoexMap"103653970"


zmaLOC103653970 | Entrez gene ID : 103653970    
Species zma sbi hvu bdi ath gma sly vvi mtr ghi sot nta osa tae bna ppo cre bra cit
Paralog 2 1 1 1 1 2 1 1 2 2 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein XP_008679018.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_008679018.3)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for XP_008679018.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103653970
zma-r.6
for
103653970
sbi-r.1
for
8073852
hvu-r.1
for
123402078
bdi-r.1
for
100839009
ath-u.5
for
AT3G01580
gma-u.5
for
100802611
gma-u.5
for
100806858
sly-u.5
for
101266187
vvi-u.5
for
104877337
mtr-u.5
for
25500904
mtr-u.5
for
11420409
ghi-r.1
for
107892334
ghi-r.1
for
107892369
sot-r.1
for
102580544
nta-r.1
for
107824666
nta-r.1
for
107795660


Ortholog ID: 11959
Species zma sbi hvu bdi ath gma gma sly vvi mtr mtr ghi ghi sot nta nta
Symbol LOC103653970 LOC8073852 LOC123402078 LOC100839009 AT3G01580 LOC100802611 LOC100806858 LOC101266187 LOC104877337 LOC25500904 LOC11420409 LOC107892334 LOC107892369 LOC102580544 LOC107824666 LOC107795660
Function* putative pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580 putative pentatricopeptide repeat-containing protein At3g01580
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103653970 8073852 123402078 100839009 821107 100802611 100806858 101266187 104877337 25500904 11420409 107892334 107892369 102580544 107824666 107795660
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