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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25483701   protein TRANSPARENT TESTA 9 
 mtr-r.5   25483701   protein TRANSPARENT TESTA 9 
 gma-u.5   100815334   protein TRANSPARENT TESTA 9 
 gma-u.5   102666080   protein TRANSPARENT TESTA 9 
 ppo-u.5   7466002   protein TRANSPARENT TESTA 9 
 vvi-u.5   100854209   protein TRANSPARENT TESTA 9 
 ghi-r.1   107889433   protein TRANSPARENT TESTA 9 
 ghi-r.1   107891179   protein TRANSPARENT TESTA 9 
 cit-r.1   102620086   protein TRANSPARENT TESTA 9-like 

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Top 50 coexpressed genes to 25483701 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25483701 (mtr-u.5 coexpression data)

CoexMap"25483701"


mtrLOC25483701 | Entrez gene ID : 25483701      
Species mtr gma ppo vvi ghi cit cre bra ath hvu nta bna tae bdi osa zma sly sot sbi
Paralog 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901096 [list] [network] regulation of autophagosome maturation  (3 genes)  IEA  
GO:0007034 [list] [network] vacuolar transport  (57 genes)  IEA  
GO:0016197 [list] [network] endosomal transport  (59 genes)  IEA  
GO CC
GO:0005770 [list] [network] late endosome  (32 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (374 genes)  IEA  
GO MF
Protein XP_024633291.2 [sequence] [blastp]
XP_039683067.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for XP_024633291.2)
chlo 3,  nucl 2,  plas 2,  chlo_mito 2,  nucl_plas 2  (predict for XP_039683067.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_024633291.2)
other 5,  mito 4  (predict for XP_039683067.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25483701
mtr-r.5
for
25483701
gma-u.5
for
100815334
gma-u.5
for
102666080
ppo-u.5
for
7466002
vvi-u.5
for
100854209
ghi-r.1
for
107889433
ghi-r.1
for
107891179
cit-r.1
for
102620086


Ortholog ID: 17666
Species mtr gma gma ppo vvi ghi ghi cit
Symbol LOC25483701 LOC100815334 LOC102666080 LOC7466002 LOC100854209 LOC107889433 LOC107891179 LOC102620086
Function* protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25483701 100815334 102666080 7466002 100854209 107889433 107891179 102620086
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