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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889433   protein TRANSPARENT TESTA 9 
 ghi-r.1   107891179   protein TRANSPARENT TESTA 9 
 cit-r.1   102620086   protein TRANSPARENT TESTA 9-like 
 gma-u.5   100815334   protein TRANSPARENT TESTA 9 
 gma-u.5   102666080   protein TRANSPARENT TESTA 9 
 vvi-u.5   100854209   protein TRANSPARENT TESTA 9 
 ppo-u.5   7466002   protein TRANSPARENT TESTA 9 
 mtr-u.5   25483701   protein TRANSPARENT TESTA 9 

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Top 50 coexpressed genes to 107889433 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889433 (ghi-r.1 coexpression data)

CoexMap"107889433"


ghiLOC107889433 | Entrez gene ID : 107889433    
Species ghi cit gma vvi ppo mtr sbi osa sot sly bra tae ath bna hvu zma cre nta bdi
Paralog 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901096 [list] [network] regulation of autophagosome maturation  (4 genes)  IEA  
GO:0008333 [list] [network] endosome to lysosome transport  (12 genes)  IEA  
GO:0016197 [list] [network] endosomal transport  (199 genes)  IEA  
GO CC
GO:0036020 [list] [network] endolysosome membrane  (4 genes)  IEA  
GO:0005770 [list] [network] late endosome  (96 genes)  IEA  
GO MF
Protein XP_016669336.2 [sequence] [blastp]
XP_016669337.2 [sequence] [blastp]
XP_040932586.1 [sequence] [blastp]
XP_040932587.1 [sequence] [blastp]
XP_040932588.1 [sequence] [blastp]
XP_040932589.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  chlo 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for XP_016669336.2)
plas 7,  chlo 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for XP_016669337.2)
plas 7,  chlo 1,  mito 1,  E.R. 1,  pero 1,  chlo_mito 1  (predict for XP_040932586.1)
plas 5,  chlo 3,  E.R._plas 3,  mito_plas 3  (predict for XP_040932587.1)
plas 6,  vacu 2,  E.R. 1,  golg 1  (predict for XP_040932588.1)
plas 6,  E.R. 1,  nucl 1,  vacu 1,  golg 1,  cyto_E.R. 1  (predict for XP_040932589.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_016669336.2)
mito 7  (predict for XP_016669337.2)
mito 7  (predict for XP_040932586.1)
mito 4,  other 3  (predict for XP_040932587.1)
other 4,  scret 4  (predict for XP_040932588.1)
other 5,  scret 5  (predict for XP_040932589.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889433
ghi-r.1
for
107891179
cit-r.1
for
102620086
gma-u.5
for
100815334
gma-u.5
for
102666080
vvi-u.5
for
100854209
ppo-u.5
for
7466002
mtr-u.5
for
25483701


Ortholog ID: 17666
Species ghi ghi cit gma gma vvi ppo mtr
Symbol LOC107889433 LOC107891179 LOC102620086 LOC100815334 LOC102666080 LOC100854209 LOC7466002 LOC25483701
Function* protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9-like protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9 protein TRANSPARENT TESTA 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr03040 Spliceosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889433 107891179 102620086 100815334 102666080 100854209 7466002 25483701
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