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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25498917   sister chromatid cohesion 1 protein 4 
 mtr-r.5   25498917   sister chromatid cohesion 1 protein 4 
 gma-u.5   100809967   sister chromatid cohesion 1 protein 4 
 gma-u.5   100803412   sister chromatid cohesion 1 protein 4 
 ppo-u.5   7464594   sister chromatid cohesion 1 protein 4 
 ppo-u.5   7472469   sister chromatid cohesion 1 protein 4 
 ath-u.5   SYN4   sister chromatid cohesion 1 protein 4 
 bra-r.6   117131608   sister chromatid cohesion 1 protein 4-like 
 bra-r.6   103856189   sister chromatid cohesion 1 protein 4 
 bra-r.6   103851033   sister chromatid cohesion 1 protein 4 
 vvi-u.5   100263480   sister chromatid cohesion 1 protein 4 
 ghi-r.1   107895058   sister chromatid cohesion 1 protein 4 
 ghi-r.1   107928341   sister chromatid cohesion 1 protein 4 
 ghi-r.1   107920049   sister chromatid cohesion 1 protein 4 
 bna-r.1   106372208   sister chromatid cohesion 1 protein 4-like 
 bna-r.1   125581283   sister chromatid cohesion 1 protein 4-like 
 bna-r.1   125594091   sister chromatid cohesion 1 protein 4-like 
 cit-r.1   102622501   hypothetical protein 
 sly-u.5   101252346   sister chromatid cohesion 1 protein 4 
 sot-r.1   102601619   sister chromatid cohesion 1 protein 4 
 nta-r.1   107817441   sister chromatid cohesion 1 protein 4 
 nta-r.1   107760537   sister chromatid cohesion 1 protein 4 
 osa-u.5   4325108   sister chromatid cohesion 1 protein 4 
 zma-u.5   103636402   uncharacterized LOC103636402 
 zma-u.5   100383357   uncharacterized LOC100383357 
 tae-r.2   123062862   uncharacterized LOC123062862 
 tae-r.2   123071708   uncharacterized LOC123071708 
 tae-r.2   123080054   sister chromatid cohesion 1 protein 4 
 hvu-r.1   123445058   uncharacterized LOC123445058 
 sbi-r.1   8056111   sister chromatid cohesion 1 protein 4 
 bdi-r.1   100841414   sister chromatid cohesion 1 protein 4 

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Top 50 coexpressed genes to 25498917 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25498917 (mtr-u.5 coexpression data)

CoexMap"25498917"


mtrLOC25498917 | Entrez gene ID : 25498917      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 2 2 1 3 1 3 3 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990414 [list] [network] replication-born double-strand break repair via sister chromatid exchange  (4 genes)  IEA  
GO:0007062 [list] [network] sister chromatid cohesion  (33 genes)  IEA  
GO CC
GO:0008278 [list] [network] cohesin complex  (8 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (178 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013449380.2 [sequence] [blastp]
XP_039683477.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_013449380.2)
chlo 6,  nucl 4  (predict for XP_039683477.1)
Subcellular
localization
TargetP
other 5  (predict for XP_013449380.2)
other 5  (predict for XP_039683477.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25498917
mtr-r.5
for
25498917
gma-u.5
for
100809967
gma-u.5
for
100803412
ppo-u.5
for
7464594
ppo-u.5
for
7472469
ath-u.5
for
SYN4
bra-r.6
for
117131608
bra-r.6
for
103856189
bra-r.6
for
103851033
vvi-u.5
for
100263480
ghi-r.1
for
107895058
ghi-r.1
for
107928341
ghi-r.1
for
107920049
bna-r.1
for
106372208
bna-r.1
for
125581283
bna-r.1
for
125594091
cit-r.1
for
102622501
sly-u.5
for
101252346
sot-r.1
for
102601619
nta-r.1
for
107817441
nta-r.1
for
107760537
osa-u.5
for
4325108
zma-u.5
for
103636402
zma-u.5
for
100383357
tae-r.2
for
123062862
tae-r.2
for
123071708
tae-r.2
for
123080054
hvu-r.1
for
123445058
sbi-r.1
for
8056111
bdi-r.1
for
100841414


Ortholog ID: 4439
Species mtr gma gma ppo ppo ath bra bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC25498917 LOC100809967 LOC100803412 LOC7464594 LOC7472469 SYN4 LOC117131608 LOC103856189 LOC103851033 LOC100263480 LOC107895058 LOC107928341 LOC107919977 LOC125594124 LOC125594128 LOC106433031 LOC102622501 LOC101252346 LOC102601619 LOC107817441 LOC107760537 LOC4325108 LOC103636402 LOC100383357 LOC123062862 LOC123080054 LOC123189310 LOC123445058 LOC8056111 LOC100841414
Function* sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4-like sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4-like sister chromatid cohesion 1 protein 4-like sister chromatid cohesion 1 protein 4 hypothetical protein sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 uncharacterized LOC103636402 uncharacterized LOC100383357 uncharacterized LOC123062862 sister chromatid cohesion 1 protein 4 uncharacterized LOC123189310 uncharacterized LOC123445058 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03018 RNA degradation 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi00230 Purine metabolism 2
ghi00232 Caffeine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta02010 ABC transporters 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25498917 100809967 100803412 7464594 7472469 831487 117131608 103856189 103851033 100263480 107895058 107928341 107919977 125594124 125594128 106433031 102622501 101252346 102601619 107817441 107760537 4325108 103636402 100383357 123062862 123080054 123189310 123445058 8056111 100841414
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