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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5  4325108  sister chromatid cohesion 1 protein 4 
 osa-r.6  4325108  sister chromatid cohesion 1 protein 4 
 osa-m.8  4325108  sister chromatid cohesion 1 protein 4 
 osa-e.1  4325108  sister chromatid cohesion 1 protein 4 
 tae-r.2  123062862  uncharacterized LOC123062862 
 tae-r.2  123071708  uncharacterized LOC123071708 
 tae-r.2  123080054  sister chromatid cohesion 1 protein 4 
 hvu-r.1  123445058  uncharacterized LOC123445058 
 bdi-r.1  100841414  sister chromatid cohesion 1 protein 4 
 zma-u.5  103636402  uncharacterized LOC103636402 
 zma-u.5  100383357  uncharacterized LOC100383357 
 sbi-r.1  8056111  sister chromatid cohesion 1 protein 4 
 ath-u.5  SYN4  sister chromatid cohesion 1 protein 4 
 gma-u.5  100809967  sister chromatid cohesion 1 protein 4 
 gma-u.5  100803412  sister chromatid cohesion 1 protein 4 
 sly-u.5  101252346  sister chromatid cohesion 1 protein 4 
 bra-r.6  103846339  sister chromatid cohesion 1 protein 4 
 bra-r.6  103851033  sister chromatid cohesion 1 protein 4 
 bra-r.6  103856189  sister chromatid cohesion 1 protein 4 
 vvi-u.5  100263480  sister chromatid cohesion 1 protein 4 
 ppo-u.5  7472469  sister chromatid cohesion 1 protein 4 
 ppo-u.5  7464594  sister chromatid cohesion 1 protein 4 
 mtr-u.5  25498917  sister chromatid cohesion 1 protein 4 
 ghi-r.1  107895058  sister chromatid cohesion 1 protein 4 
 ghi-r.1  107928341  sister chromatid cohesion 1 protein 4 
 ghi-r.1  107920049  sister chromatid cohesion 1 protein 4 
 bna-r.1  106372208  sister chromatid cohesion 1 protein 4-like 
 bna-r.1  125581283  sister chromatid cohesion 1 protein 4-like 
 bna-r.1  125594091  sister chromatid cohesion 1 protein 4-like 
 sot-r.1  102601619  sister chromatid cohesion 1 protein 4 
 cit-r.1  102622501  hypothetical protein 
 nta-r.1  107817441  sister chromatid cohesion 1 protein 4 
 nta-r.1  107760537  sister chromatid cohesion 1 protein 4 

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Top 50 coexpressed genes to 4325108 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4325108 (osa-u.5 coexpression data)

CoexMap"4325108"


osaLOC4325108 | Entrez gene ID : 4325108
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 3 1 1 2 1 1 2 1 3 1 2 1 3 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990414 [list] [network] replication-born double-strand break repair via sister chromatid exchange  (4 genes)  IEA  
GO:0007062 [list] [network] sister chromatid cohesion  (31 genes)  IEA  
GO CC
GO:0008278 [list] [network] cohesin complex  (8 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (130 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015616445.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_015616445.1)
Subcellular
localization
TargetP
other 5  (predict for XP_015616445.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

osa-u.5
for
4325108


osa-r.6
for
4325108


osa-m.8
for
4325108


osa-e.1
for
4325108


tae-r.2
for
123062862


tae-r.2
for
123071708


tae-r.2
for
123080054


hvu-r.1
for
123445058


bdi-r.1
for
100841414


zma-u.5
for
103636402


zma-u.5
for
100383357


sbi-r.1
for
8056111


ath-u.5
for
SYN4


gma-u.5
for
100809967


gma-u.5
for
100803412


sly-u.5
for
101252346


bra-r.6
for
103846339


bra-r.6
for
103851033


bra-r.6
for
103856189


vvi-u.5
for
100263480


ppo-u.5
for
7472469


ppo-u.5
for
7464594


mtr-u.5
for
25498917


ghi-r.1
for
107895058


ghi-r.1
for
107928341


ghi-r.1
for
107920049


bna-r.1
for
106372208


bna-r.1
for
125581283


bna-r.1
for
125594091


sot-r.1
for
102601619


cit-r.1
for
102622501


nta-r.1
for
107817441


nta-r.1
for
107760537



Ortholog ID: 4439
Species osa tae tae tae hvu bdi zma zma sbi ath gma gma sly bra bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta
Symbol LOC4325108 LOC123062862 LOC123080054 LOC123189310 LOC123445058 LOC100841414 LOC103636402 LOC100383357 LOC8056111 SYN4 LOC100809967 LOC100803412 LOC101252346 LOC103851033 LOC103856189 LOC117131608 LOC100263480 LOC7472469 LOC7464594 LOC25498917 LOC107895058 LOC107928341 LOC107919977 LOC125594124 LOC125594128 LOC106433031 LOC102601619 LOC102622501 LOC107817441 LOC107760537
Function* sister chromatid cohesion 1 protein 4 uncharacterized LOC123062862 sister chromatid cohesion 1 protein 4 uncharacterized LOC123189310 uncharacterized LOC123445058 sister chromatid cohesion 1 protein 4 uncharacterized LOC103636402 uncharacterized LOC100383357 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4-like sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4-like sister chromatid cohesion 1 protein 4-like sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4 hypothetical protein sister chromatid cohesion 1 protein 4 sister chromatid cohesion 1 protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00310 Lysine degradation 4
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr03018 RNA degradation 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi00230 Purine metabolism 2
ghi00232 Caffeine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
ghi03083 Polycomb repressive complex 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 4
nta03083 Polycomb repressive complex 4
nta03250 Viral life cycle - HIV-1 4
nta02010 ABC transporters 2
nta04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4325108 123062862 123080054 123189310 123445058 100841414 103636402 100383357 8056111 831487 100809967 100803412 101252346 103851033 103856189 117131608 100263480 7472469 7464594 25498917 107895058 107928341 107919977 125594124 125594128 106433031 102601619 102622501 107817441 107760537
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