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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25499800   pentatricopeptide repeat-containing protein At4g19890 
 mtr-r.5   25499800   pentatricopeptide repeat-containing protein At4g19890 
 mtr-u.5   25497440   pentatricopeptide repeat-containing protein At4g19890 
 gma-u.5   100798435   pentatricopeptide repeat-containing protein At4g19890 
 ppo-u.5   7476719   pentatricopeptide repeat-containing protein At4g19890 
 ath-u.5   AT4G19890   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6   103857807   pentatricopeptide repeat-containing protein At4g19890 
 vvi-u.5   100854972   pentatricopeptide repeat-containing protein At4g19890 
 ghi-r.1   107905990   pentatricopeptide repeat-containing protein At4g19890 
 bna-r.1   106365927   pentatricopeptide repeat-containing protein At4g19890 
 bna-r.1   106437564   pentatricopeptide repeat-containing protein At4g19890-like 
 cit-r.1   102609250   pentatricopeptide repeat-containing protein At4g19890 
 sly-u.5   101244928   pentatricopeptide repeat-containing protein 
 sot-r.1   102598244   pentatricopeptide repeat-containing protein At4g19890 
 nta-r.1   107828220   uncharacterized LOC107828220 
 nta-r.1   107759699   uncharacterized LOC107759699 
 osa-u.5   4350893   pentatricopeptide repeat-containing protein At4g19890 
 tae-r.2   123163878   pentatricopeptide repeat-containing protein At4g19890 
 tae-r.2   123157607   pentatricopeptide repeat-containing protein At4g19890 
 hvu-r.1   123408245   pentatricopeptide repeat-containing protein At4g19890-like 
 sbi-r.1   8066709   pentatricopeptide repeat-containing protein At4g19890 
 bdi-r.1   100834036   pentatricopeptide repeat-containing protein At4g19890 

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Top 50 coexpressed genes to 25499800 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25499800 (mtr-u.5 coexpression data)

CoexMap"25499800"


mtrLOC25499800 | Entrez gene ID : 25499800      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa tae hvu sbi bdi cre zma
Paralog 3 1 1 1 1 1 1 2 1 1 1 2 1 2 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (294 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013447799.3 [sequence] [blastp]
XP_024625563.2 [sequence] [blastp]
XP_024625564.2 [sequence] [blastp]
XP_024625566.2 [sequence] [blastp]
XP_024625567.2 [sequence] [blastp]
XP_024625568.2 [sequence] [blastp]
XP_024625569.2 [sequence] [blastp]
XP_024625571.2 [sequence] [blastp]
XP_024625572.2 [sequence] [blastp]
XP_024625573.2 [sequence] [blastp]
XP_024625574.2 [sequence] [blastp]
XP_024625575.2 [sequence] [blastp]
XP_024625576.2 [sequence] [blastp]
XP_024625579.2 [sequence] [blastp]
XP_039683581.1 [sequence] [blastp]
XP_039683582.1 [sequence] [blastp]
XP_039683583.1 [sequence] [blastp]
XP_039683584.1 [sequence] [blastp]
XP_039683585.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_013447799.3)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625563.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625564.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625566.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625567.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625568.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625569.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625571.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625572.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625573.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625574.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625575.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625576.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_024625579.2)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_039683581.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_039683582.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_039683583.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_039683584.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_039683585.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_013447799.3)
mito 8  (predict for XP_024625563.2)
mito 8  (predict for XP_024625564.2)
mito 8  (predict for XP_024625566.2)
mito 8  (predict for XP_024625567.2)
mito 8  (predict for XP_024625568.2)
mito 8  (predict for XP_024625569.2)
mito 8  (predict for XP_024625571.2)
mito 8  (predict for XP_024625572.2)
mito 8  (predict for XP_024625573.2)
mito 8  (predict for XP_024625574.2)
mito 8  (predict for XP_024625575.2)
mito 8  (predict for XP_024625576.2)
mito 8  (predict for XP_024625579.2)
mito 8  (predict for XP_039683581.1)
mito 8  (predict for XP_039683582.1)
mito 8  (predict for XP_039683583.1)
mito 8  (predict for XP_039683584.1)
mito 8  (predict for XP_039683585.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25499800
mtr-r.5
for
25499800
mtr-u.5
for
25497440
gma-u.5
for
100798435
ppo-u.5
for
7476719
ath-u.5
for
AT4G19890
bra-r.6
for
103857807
vvi-u.5
for
100854972
ghi-r.1
for
107905990
bna-r.1
for
106365927
bna-r.1
for
106437564
cit-r.1
for
102609250
sly-u.5
for
101244928
sot-r.1
for
102598244
nta-r.1
for
107828220
nta-r.1
for
107759699
osa-u.5
for
4350893
tae-r.2
for
123163878
tae-r.2
for
123157607
hvu-r.1
for
123408245
sbi-r.1
for
8066709
bdi-r.1
for
100834036


Ortholog ID: 11548
Species mtr mtr gma ppo ath bra vvi ghi bna bna cit sly sot nta nta osa tae tae hvu sbi bdi
Symbol LOC25499800 LOC25497440 LOC100798435 LOC7476719 AT4G19890 LOC103857807 LOC100854972 LOC107905990 LOC106365927 LOC106437564 LOC102609250 LOC101244928 LOC102598244 LOC107828220 LOC107759699 LOC4350893 LOC123163878 LOC123157607 LOC123408245 LOC8066709 LOC100834036
Function* pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890-like pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g19890 uncharacterized LOC107828220 uncharacterized LOC107759699 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890-like pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25499800 25497440 100798435 7476719 10723133 103857807 100854972 107905990 106365927 106437564 102609250 101244928 102598244 107828220 107759699 4350893 123163878 123157607 123408245 8066709 100834036
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