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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1  100834036  pentatricopeptide repeat-containing protein At4g19890 
 tae-r.2  123163878  pentatricopeptide repeat-containing protein At4g19890 
 tae-r.2  123157607  pentatricopeptide repeat-containing protein At4g19890 
 hvu-r.1  123408245  pentatricopeptide repeat-containing protein At4g19890-like 
 osa-u.5  4350893  pentatricopeptide repeat-containing protein At4g19890 
 sbi-r.1  8066709  pentatricopeptide repeat-containing protein At4g19890 
 ath-u.5  AT4G19890  Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5  100798435  pentatricopeptide repeat-containing protein At4g19890 
 sly-u.5  101244928  pentatricopeptide repeat-containing protein 
 bra-r.6  103857807  pentatricopeptide repeat-containing protein At4g19890 
 vvi-u.5  100854972  pentatricopeptide repeat-containing protein At4g19890 
 ppo-u.5  7476719  pentatricopeptide repeat-containing protein At4g19890 
 mtr-u.5  25499800  pentatricopeptide repeat-containing protein At4g19890 
 mtr-u.5  25497440  pentatricopeptide repeat-containing protein At4g19890 
 ghi-r.1  107905990  pentatricopeptide repeat-containing protein At4g19890 
 bna-r.1  106365927  pentatricopeptide repeat-containing protein At4g19890 
 bna-r.1  106437564  pentatricopeptide repeat-containing protein At4g19890-like 
 sot-r.1  102598244  pentatricopeptide repeat-containing protein At4g19890 
 cit-r.1  102609250  pentatricopeptide repeat-containing protein At4g19890 
 nta-r.1  107759699  uncharacterized LOC107759699 
 nta-r.1  107828220  uncharacterized LOC107828220 

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Top 50 coexpressed genes to 100834036 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834036 (bdi-r.1 coexpression data)

CoexMap"100834036"


bdiLOC100834036 | Entrez gene ID : 100834036
Species bdi tae hvu osa sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta zma cre
Paralog 1 2 1 1 1 1 1 1 1 1 1 2 1 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003575878.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_003575878.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003575878.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bdi-r.1
for
100834036


tae-r.2
for
123163878


tae-r.2
for
123157607


hvu-r.1
for
123408245


osa-u.5
for
4350893


sbi-r.1
for
8066709


ath-u.5
for
AT4G19890


gma-u.5
for
100798435


sly-u.5
for
101244928


bra-r.6
for
103857807


vvi-u.5
for
100854972


ppo-u.5
for
7476719


mtr-u.5
for
25499800


mtr-u.5
for
25497440


ghi-r.1
for
107905990


bna-r.1
for
106365927


bna-r.1
for
106437564


sot-r.1
for
102598244


cit-r.1
for
102609250


nta-r.1
for
107759699


nta-r.1
for
107828220



Ortholog ID: 11548
Species bdi tae tae hvu osa sbi ath gma sly bra vvi ppo mtr mtr ghi bna bna sot cit nta nta
Symbol LOC100834036 LOC123163878 LOC123157607 LOC123408245 LOC4350893 LOC8066709 AT4G19890 LOC100798435 LOC101244928 LOC103857807 LOC100854972 LOC7476719 LOC25499800 LOC25497440 LOC107905990 LOC106365927 LOC106437564 LOC102598244 LOC102609250 LOC107759699 LOC107828220
Function* pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890-like pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890-like pentatricopeptide repeat-containing protein At4g19890 pentatricopeptide repeat-containing protein At4g19890 uncharacterized LOC107759699 uncharacterized LOC107828220
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834036 123163878 123157607 123408245 4350893 8066709 10723133 100798435 101244928 103857807 100854972 7476719 25499800 25497440 107905990 106365927 106437564 102598244 102609250 107759699 107828220
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