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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-u.5   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-r.7   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-e.2   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-m.4.bio   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-m.4.hor   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-m.4.lig   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-m.4.str   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-m.4.tis   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-u.5   AT4G30620   Putative BCR, YbaB family COG0718 
 bra-r.6   103834664   nucleoid-associated protein At4g30620, chloroplastic 
 bra-r.6   103842388   nucleoid-associated protein At2g24020, chloroplastic 
 bna-r.1   106411697   nucleoid-associated protein At2g24020, chloroplastic 
 bna-r.1   106378422   nucleoid-associated protein At4g30620, chloroplastic 
 bna-r.1   106368633   nucleoid-associated protein At2g24020, chloroplastic 
 ghi-r.1   107919916   nucleoid-associated protein At4g30620, chloroplastic 
 ghi-r.1   107906893   nucleoid-associated protein At2g24020, chloroplastic 
 ghi-r.1   107953790   nucleoid-associated protein At4g30620, chloroplastic 
 cit-r.1   102611565   hypothetical protein 
 gma-u.5   100305795   uncharacterized LOC100305795 
 gma-u.5   100782796   nucleoid-associated protein At4g30620, chloroplastic 
 vvi-u.5   100243229   nucleoid-associated protein At4g30620, chloroplastic 
 ppo-u.5   7489439   nucleoid-associated protein At2g24020, chloroplastic 
 mtr-u.5   25480982   nucleoid-associated protein At4g30620, chloroplastic 
 mtr-u.5   11442689   nucleoid-associated protein At4g30620, chloroplastic 
 sly-u.5   101251012   nucleoid-associated protein At4g30620, chloroplastic 
 sly-u.5   101266487   nucleoid-associated protein At4g30620, chloroplastic-like 
 sot-r.1   102597318   nucleoid-associated protein At4g30620, chloroplastic 
 sot-r.1   102593509   nucleoid-associated protein At4g30620, chloroplastic-like 
 nta-r.1   107796456   nucleoid-associated protein At4g30620, chloroplastic 
 nta-r.1   107789621   nucleoid-associated protein At4g30620, chloroplastic 
 nta-r.1   107777475   nucleoid-associated protein At4g30620, chloroplastic-like 
 osa-u.5   4328507   nucleoid-associated protein At2g24020, chloroplastic 
 zma-u.5   100273072   uncharacterized LOC100273072 
 zma-u.5   100273390   uncharacterized LOC100273390 
 tae-r.2   123144055   nucleoid-associated protein At4g30620, chloroplastic 
 tae-r.2   123136547   nucleoid-associated protein At2g24020, chloroplastic 
 tae-r.2   123132479   nucleoid-associated protein At4g30620, chloroplastic 
 hvu-r.1   123402480   nucleoid-associated protein At4g30620, chloroplastic-like 
 sbi-r.1   8077624   nucleoid-associated protein At2g24020, chloroplastic 
 bdi-r.1   100826662   nucleoid-associated protein At2g24020, chloroplastic 
 cre-r.1   CHLRE_10g458550v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G24020 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G24020 (ath-m.9 coexpression data)

CoexMap"816936"


athAT2G24020 | Entrez gene ID : 816936      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 2 1 1 2 2 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045037 [list] [network] protein import into chloroplast stroma  (29 genes)  IGI  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA IDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005622 [list] [network] intracellular anatomical structure  (21227 genes)  IGI  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001189586.1 [sequence] [blastp]
NP_565561.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_001189586.1)
chlo 9  (predict for NP_565561.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001189586.1)
chlo 7  (predict for NP_565561.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G24020
ath-u.5
for
AT2G24020
ath-r.7
for
AT2G24020
ath-e.2
for
AT2G24020
ath-m.4.bio
for
AT2G24020
ath-m.4.hor
for
AT2G24020
ath-m.4.lig
for
AT2G24020
ath-m.4.str
for
AT2G24020
ath-m.4.tis
for
AT2G24020
ath-u.5
for
AT4G30620
bra-r.6
for
103834664
bra-r.6
for
103842388
bna-r.1
for
106411697
bna-r.1
for
106378422
bna-r.1
for
106368633
ghi-r.1
for
107919916
ghi-r.1
for
107906893
ghi-r.1
for
107953790
cit-r.1
for
102611565
gma-u.5
for
100305795
gma-u.5
for
100782796
vvi-u.5
for
100243229
ppo-u.5
for
7489439
mtr-u.5
for
25480982
mtr-u.5
for
11442689
sly-u.5
for
101251012
sly-u.5
for
101266487
sot-r.1
for
102597318
sot-r.1
for
102593509
nta-r.1
for
107796456
nta-r.1
for
107789621
nta-r.1
for
107777475
osa-u.5
for
4328507
zma-u.5
for
100273072
zma-u.5
for
100273390
tae-r.2
for
123144055
tae-r.2
for
123136547
tae-r.2
for
123132479
hvu-r.1
for
123402480
sbi-r.1
for
8077624
bdi-r.1
for
100826662
cre-r.1
for
CHLRE_10g458550v5


Ortholog ID: 5472
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT2G24020 AT4G30620 LOC103834664 LOC103842388 LOC106411697 LOC106368633 LOC106361143 LOC107919916 LOC107906893 LOC107953790 LOC102611565 LOC100305795 LOC100782796 LOC100243229 LOC7489439 LOC25480982 LOC11442689 LOC101251012 LOC101266487 LOC102597318 LOC102593509 LOC107796456 LOC107789621 LOC107777475 LOC4328507 LOC100273072 LOC100273390 LOC123144055 LOC123136547 LOC123132479 LOC123402480 LOC8077624 LOC100826662 CHLRE_10g458550v5
Function* Putative BCR, YbaB family COG0718 Putative BCR, YbaB family COG0718 nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic hypothetical protein uncharacterized LOC100305795 nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At2g24020, chloroplastic uncharacterized LOC100273072 uncharacterized LOC100273390 nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At2g24020, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 3
bna01200 Carbon metabolism 3
bna00030 Pentose phosphate pathway 2
bna00500 Starch and sucrose metabolism 2
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
bna00500 Starch and sucrose metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa03010 Ribosome 3
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00230 Purine metabolism 2
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816936 829185 103834664 103842388 106411697 106368633 106361143 107919916 107906893 107953790 102611565 100305795 100782796 100243229 7489439 25480982 11442689 101251012 101266487 102597318 102593509 107796456 107789621 107777475 4328507 100273072 100273390 123144055 123136547 123132479 123402480 8077624 100826662 5724130
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