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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101251012   nucleoid-associated protein At4g30620, chloroplastic 
 sly-r.6   101251012   nucleoid-associated protein At4g30620, chloroplastic 
 sly-m.5   101251012   nucleoid-associated protein At4g30620, chloroplastic 
 sly-u.5   101266487   nucleoid-associated protein At4g30620, chloroplastic-like 
 ath-u.5   AT2G24020   Putative BCR, YbaB family COG0718 
 ath-u.5   AT4G30620   Putative BCR, YbaB family COG0718 
 gma-u.5   100305795   uncharacterized LOC100305795 
 gma-u.5   100782796   nucleoid-associated protein At4g30620, chloroplastic 
 vvi-u.5   100243229   nucleoid-associated protein At4g30620, chloroplastic 
 ppo-u.5   7489439   nucleoid-associated protein At2g24020, chloroplastic 
 mtr-u.5   25480982   nucleoid-associated protein At4g30620, chloroplastic 
 mtr-u.5   11442689   nucleoid-associated protein At4g30620, chloroplastic 
 osa-u.5   4328507   nucleoid-associated protein At2g24020, chloroplastic 
 zma-u.5   100273390   uncharacterized LOC100273390 
 zma-u.5   100273072   uncharacterized LOC100273072 

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Top 50 coexpressed genes to 101251012 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101251012 (sly-u.5 coexpression data)

CoexMap"101251012"


slyLOC101251012 | Entrez gene ID : 101251012      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 2 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein XP_004244523.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_004244523.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004244523.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101251012
sly-r.6
for
101251012
sly-m.5
for
101251012
sly-u.5
for
101266487
ath-u.5
for
AT2G24020
ath-u.5
for
AT4G30620
gma-u.5
for
100305795
gma-u.5
for
100782796
vvi-u.5
for
100243229
ppo-u.5
for
7489439
mtr-u.5
for
25480982
mtr-u.5
for
11442689
osa-u.5
for
4328507
zma-u.5
for
100273390
zma-u.5
for
100273072


Ortholog ID: 5472
Species sly sly sot sot nta nta ath ath gma gma bra bra vvi ppo mtr mtr ghi ghi bna bna cit osa zma zma tae tae hvu sbi bdi cre
Symbol LOC101266487 LOC101251012 LOC102597318 LOC102593509 LOC107789621 LOC107777475 AT4G30620 AT2G24020 LOC100305795 LOC100782796 LOC103834664 LOC103842388 LOC100243229 LOC7489439 LOC11442689 LOC25480982 LOC107919916 LOC107906893 LOC106361143 LOC106368633 LOC102611565 LOC4328507 LOC100273072 LOC100273390 LOC123136547 LOC123132479 LOC123402480 LOC8077624 LOC100826662 CHLRE_10g458550v5
Function* nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like Putative BCR, YbaB family COG0718 Putative BCR, YbaB family COG0718 uncharacterized LOC100305795 nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At2g24020, chloroplastic hypothetical protein nucleoid-associated protein At2g24020, chloroplastic uncharacterized LOC100273072 uncharacterized LOC100273390 nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At4g30620, chloroplastic nucleoid-associated protein At4g30620, chloroplastic-like nucleoid-associated protein At2g24020, chloroplastic nucleoid-associated protein At2g24020, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00340 Histidine metabolism 2
bna01230 Biosynthesis of amino acids 2
bna00500 Starch and sucrose metabolism 2
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa03010 Ribosome 3
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101266487 101251012 102597318 102593509 107789621 107777475 829185 816936 100305795 100782796 103834664 103842388 100243229 7489439 11442689 25480982 107919916 107906893 106361143 106368633 102611565 4328507 100273072 100273390 123136547 123132479 123402480 8077624 100826662 5724130
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