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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-u.5   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   emb1345   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   emb1345   Transducin/WD40 repeat-like superfamily protein 
 bra-r.6   103842163   protein CIA1 
 bna-r.1   106411836   protein CIA1-like 
 ghi-r.1   107928223   protein CIA1 
 ghi-r.1   107925678   protein CIA1 
 cit-r.1   102625463   protein CIA1 
 gma-u.5   100778826   cytosolic iron-sulfur protein assembly 1-like protein 
 vvi-u.5   100256192   protein CIA1 
 ppo-u.5   7458232   protein CIA1 
 ppo-u.5   7478508   protein CIA1 
 mtr-u.5   11427181   protein CIA1 
 sly-u.5   101262559   protein CIA1 
 sot-r.1   102585671   protein CIA1-like 
 sot-r.1   102592449   protein CIA1 
 sot-r.1   102594392   protein CIA1-like 
 nta-r.1   107791693   protein CIA1 
 nta-r.1   107809969   protein CIA1 
 osa-u.5   4342847   protein CIA1 
 zma-u.5   103632169   protein CIA1 
 tae-r.2   123166149   protein CIA1 
 hvu-r.1   123409832   protein CIA1 
 sbi-r.1   8054417   protein CIA1 
 bdi-r.1   100828154   protein CIA1 
 cre-r.1   CHLRE_08g374400v5   uncharacterized protein 

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Top 50 coexpressed genes to emb1345 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to emb1345 (ath-m.9 coexpression data)

CoexMap"817147"


athemb1345 | Entrez gene ID : 817147      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 1 2 1 1 1 2 1 1 3 2 1 1 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (26 genes)  IGI  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001031421.1 [sequence] [blastp]
NP_565615.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001031421.1)
nucl 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_565615.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001031421.1)
other 7,  chlo 3  (predict for NP_565615.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
emb1345
ath-u.5
for
emb1345
ath-r.7
for
emb1345
ath-e.2
for
emb1345
ath-m.4.bio
for
emb1345
ath-m.4.hor
for
emb1345
ath-m.4.lig
for
emb1345
ath-m.4.str
for
emb1345
ath-m.4.tis
for
emb1345
bra-r.6
for
103842163
bna-r.1
for
106411836
ghi-r.1
for
107928223
ghi-r.1
for
107925678
cit-r.1
for
102625463
gma-u.5
for
100778826
vvi-u.5
for
100256192
ppo-u.5
for
7458232
ppo-u.5
for
7478508
mtr-u.5
for
11427181
sly-u.5
for
101262559
sot-r.1
for
102585671
sot-r.1
for
102592449
sot-r.1
for
102594392
nta-r.1
for
107791693
nta-r.1
for
107809969
osa-u.5
for
4342847
zma-u.5
for
103632169
tae-r.2
for
123166149
hvu-r.1
for
123409832
sbi-r.1
for
8054417
bdi-r.1
for
100828154
cre-r.1
for
CHLRE_08g374400v5


Ortholog ID: 6228
Species ath bra bna ghi ghi cit gma vvi ppo ppo mtr sly sot sot sot nta nta osa zma tae hvu sbi bdi cre
Symbol emb1345 LOC103842163 LOC106368545 LOC107928223 LOC107925678 LOC102625463 LOC100778826 LOC100256192 LOC7458232 LOC7478508 LOC11427181 LOC101262559 LOC102585671 LOC102594392 LOC102594719 LOC107791693 LOC107809969 LOC4342847 LOC103632169 LOC123148917 LOC123409832 LOC8054417 LOC100828154 CHLRE_08g374400v5
Function* Transducin/WD40 repeat-like superfamily protein protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 cytosolic iron-sulfur protein assembly 1-like protein protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1-like protein CIA1-like protein CIA1-like protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 protein CIA1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 4
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 7
bra00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 6
bna03015 mRNA surveillance pathway 6
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
ppo03013 Nucleocytoplasmic transport 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817147 103842163 106368545 107928223 107925678 102625463 100778826 100256192 7458232 7478508 11427181 101262559 102585671 102594392 102594719 107791693 107809969 4342847 103632169 123148917 123409832 8054417 100828154 5719967
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