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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G27900   coiled-coil protein 
 ath-u.5   AT2G27900   coiled-coil protein 
 ath-r.7   AT2G27900   coiled-coil protein 
 ath-e.2   AT2G27900   coiled-coil protein 
 ath-m.4.bio   AT2G27900   coiled-coil protein 
 ath-m.4.hor   AT2G27900   coiled-coil protein 
 ath-m.4.lig   AT2G27900   coiled-coil protein 
 ath-m.4.str   AT2G27900   coiled-coil protein 
 ath-m.4.tis   AT2G27900   coiled-coil protein 
 bra-r.6   103864810   syndetin 
 bra-r.6   103858305   syndetin 
 bna-r.1   106401054   syndetin 
 bna-r.1   106424304   syndetin-like 
 bna-r.1   106438436   syndetin 
 ghi-r.1   107959391   syndetin 
 ghi-r.1   107954169   syndetin 
 ghi-r.1   107906649   syndetin 
 cit-r.1   102622404   uncharacterized LOC102622404 
 gma-u.5   100803274   syndetin 
 gma-u.5   100788476   syndetin 
 vvi-u.5   100241423   uncharacterized LOC100241423 
 ppo-u.5   7496467   uncharacterized LOC7496467 
 ppo-u.5   7473002   uncharacterized LOC7473002 
 mtr-u.5   25492356   syndetin 
 sly-u.5   101265610   uncharacterized LOC101265610 
 sot-r.1   102582521   syndetin 
 nta-r.1   107783406   uncharacterized LOC107783406 
 osa-u.5   4349288   syndetin 
 zma-u.5   100384314   uncharacterized LOC100384314 
 tae-r.2   123181583   syndetin 
 tae-r.2   123127454   syndetin 
 hvu-r.1   123437973   syndetin 
 sbi-r.1   8062844   syndetin 
 bdi-r.1   100834728   syndetin 
 cre-r.1   CHLRE_10g443350v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G27900 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G27900 (ath-m.9 coexpression data)

CoexMap"817335"


athAT2G27900 | Entrez gene ID : 817335      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 2 1 1 1 1 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990745 [list] [network] EARP complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001031433.1 [sequence] [blastp]
NP_180357.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  pero 1,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for NP_001031433.1)
nucl 6,  pero 1,  chlo 1,  plas 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for NP_180357.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001031433.1)
other 8  (predict for NP_180357.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G27900
ath-u.5
for
AT2G27900
ath-r.7
for
AT2G27900
ath-e.2
for
AT2G27900
ath-m.4.bio
for
AT2G27900
ath-m.4.hor
for
AT2G27900
ath-m.4.lig
for
AT2G27900
ath-m.4.str
for
AT2G27900
ath-m.4.tis
for
AT2G27900
bra-r.6
for
103864810
bra-r.6
for
103858305
bna-r.1
for
106401054
bna-r.1
for
106424304
bna-r.1
for
106438436
ghi-r.1
for
107959391
ghi-r.1
for
107954169
ghi-r.1
for
107906649
cit-r.1
for
102622404
gma-u.5
for
100803274
gma-u.5
for
100788476
vvi-u.5
for
100241423
ppo-u.5
for
7496467
ppo-u.5
for
7473002
mtr-u.5
for
25492356
sly-u.5
for
101265610
sot-r.1
for
102582521
nta-r.1
for
107783406
osa-u.5
for
4349288
zma-u.5
for
100384314
tae-r.2
for
123181583
tae-r.2
for
123127454
hvu-r.1
for
123437973
sbi-r.1
for
8062844
bdi-r.1
for
100834728
cre-r.1
for
CHLRE_10g443350v5


Ortholog ID: 7933
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta osa zma tae tae hvu sbi bdi cre
Symbol AT2G27900 LOC103864810 LOC103858305 LOC106401054 LOC106438436 LOC106446735 LOC107959391 LOC107954169 LOC107906649 LOC102622404 LOC100803274 LOC100788476 LOC100241423 LOC7496467 LOC7473002 LOC25492356 LOC101265610 LOC102582521 LOC107783406 LOC4349288 LOC100384314 LOC123181583 LOC123127454 LOC123437973 LOC8062844 LOC100834728 CHLRE_10g443350v5
Function* coiled-coil protein syndetin syndetin syndetin syndetin syndetin syndetin syndetin syndetin uncharacterized LOC102622404 syndetin syndetin uncharacterized LOC100241423 uncharacterized LOC7496467 uncharacterized LOC7473002 syndetin uncharacterized LOC101265610 syndetin uncharacterized LOC107783406 syndetin uncharacterized LOC100384314 syndetin syndetin syndetin syndetin syndetin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 3
bra03420 Nucleotide excision repair 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04141 Protein processing in endoplasmic reticulum 2
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 4
tae05100 Bacterial invasion of epithelial cells 4
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 6
cre04145 Phagosome 6
cre04142 Lysosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817335 103864810 103858305 106401054 106438436 106446735 107959391 107954169 107906649 102622404 100803274 100788476 100241423 7496467 7473002 25492356 101265610 102582521 107783406 4349288 100384314 123181583 123127454 123437973 8062844 100834728 5716103
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