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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8062844   syndetin 
 zma-u.5   100384314   uncharacterized LOC100384314 
 osa-u.5   4349288   syndetin 
 ath-u.5   AT2G27900   coiled-coil protein 
 gma-u.5   100803274   syndetin 
 gma-u.5   100788476   syndetin 
 sly-u.5   101265610   uncharacterized LOC101265610 
 vvi-u.5   100241423   uncharacterized LOC100241423 
 ppo-u.5   7496467   uncharacterized LOC7496467 
 ppo-u.5   7473002   uncharacterized LOC7473002 
 mtr-u.5   25492356   syndetin 

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Top 50 coexpressed genes to 8062844 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8062844 (sbi-r.1 coexpression data)

CoexMap"8062844"


sbiLOC8062844 | Entrez gene ID : 8062844      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032456 [list] [network] endocytic recycling  (4 genes)  IEA  
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (18 genes)  IEA  
GO CC
GO:1990745 [list] [network] EARP complex  (2 genes)  IEA  
GO MF
GO:0000149 [list] [network] SNARE binding  (66 genes)  IEA  
Protein XP_002467550.1 [sequence] [blastp]
XP_021320055.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  E.R. 1,  pero 1  (predict for XP_002467550.1)
chlo 6,  nucl 2,  E.R. 1,  pero 1  (predict for XP_021320055.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_002467550.1)
chlo 6,  other 3  (predict for XP_021320055.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8062844

.
zma-u.5
for
100384314

.
osa-u.5
for
4349288

.
ath-u.5
for
AT2G27900

.
gma-u.5
for
100803274

.
gma-u.5
for
100788476

.
sly-u.5
for
101265610

.
vvi-u.5
for
100241423

.
ppo-u.5
for
7496467

.
ppo-u.5
for
7473002

.
mtr-u.5
for
25492356

.


Ortholog ID: 7933
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT2G27900 LOC100803274 LOC100788476 LOC101265610 LOC4349288 LOC100384314 LOC103858305 LOC103864810 LOC100241423 LOC7496467 LOC7473002 LOC25492356 LOC123181583 LOC123127454 LOC123437973 LOC107906649 LOC107959391 LOC106401054 LOC106438436 CHLRE_10g443350v5 LOC8062844 LOC102582521 LOC102622404 LOC100834728 LOC107783406
Function* coiled-coil protein syndetin syndetin uncharacterized LOC101265610 syndetin uncharacterized LOC100384314 syndetin syndetin uncharacterized LOC100241423 uncharacterized LOC7496467 uncharacterized LOC7473002 syndetin syndetin syndetin syndetin syndetin syndetin syndetin syndetin uncharacterized protein syndetin syndetin uncharacterized LOC102622404 syndetin uncharacterized LOC107783406
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 3
bra03420 Nucleotide excision repair 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 4
tae05100 Bacterial invasion of epithelial cells 4
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 6
cre04145 Phagosome 6
cre04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04142 Lysosome 3
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04141 Protein processing in endoplasmic reticulum 2
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817335 100803274 100788476 101265610 4349288 100384314 103858305 103864810 100241423 7496467 7473002 25492356 123181583 123127454 123437973 107906649 107959391 106401054 106438436 5716103 8062844 102582521 102622404 100834728 107783406
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