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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G39100   RING/U-box superfamily protein 
 ath-u.5   AT2G39100   RING/U-box superfamily protein 
 ath-r.7   AT2G39100   RING/U-box superfamily protein 
 ath-e.2   AT2G39100   RING/U-box superfamily protein 
 ath-m.4.bio   AT2G39100   RING/U-box superfamily protein 
 ath-m.4.hor   AT2G39100   RING/U-box superfamily protein 
 ath-m.4.lig   AT2G39100   RING/U-box superfamily protein 
 ath-m.4.str   AT2G39100   RING/U-box superfamily protein 
 ath-m.4.tis   AT2G39100   RING/U-box superfamily protein 
 bra-r.6   103865701   E3 ubiquitin-protein ligase Topors 
 bna-r.1   106447693   E3 ubiquitin-protein ligase Topors 
 bna-r.1   106402467   E3 ubiquitin-protein ligase Topors-like 
 ghi-r.1   107916037   E3 ubiquitin-protein ligase Topors 
 ghi-r.1   107920157   E3 ubiquitin-protein ligase Topors 
 cit-r.1   102607299   uncharacterized LOC102607299 
 vvi-u.5   100259613   uncharacterized LOC100259613 
 ppo-u.5   18101853   uncharacterized LOC18101853 
 sly-u.5   101268001   uncharacterized LOC101268001 
 sot-r.1   102580886   E3 ubiquitin-protein ligase Topors 
 nta-r.1   107792818   uncharacterized LOC107792818 
 nta-r.1   107799545   uncharacterized LOC107799545 

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Top 50 coexpressed genes to AT2G39100 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G39100 (ath-m.9 coexpression data)

CoexMap"818496"


athAT2G39100 | Entrez gene ID : 818496      
Species ath bra bna ghi cit vvi ppo sly sot nta sbi cre mtr tae zma osa bdi gma hvu
Paralog 9 1 2 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323588.1 [sequence] [blastp]
NP_850310.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  mito 2  (predict for NP_001323588.1)
nucl 5,  mito 3,  chlo 1,  cyto_mito 1  (predict for NP_850310.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001323588.1)
chlo 7  (predict for NP_850310.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G39100
ath-u.5
for
AT2G39100
ath-r.7
for
AT2G39100
ath-e.2
for
AT2G39100
ath-m.4.bio
for
AT2G39100
ath-m.4.hor
for
AT2G39100
ath-m.4.lig
for
AT2G39100
ath-m.4.str
for
AT2G39100
ath-m.4.tis
for
AT2G39100
bra-r.6
for
103865701
bna-r.1
for
106447693
bna-r.1
for
106402467
ghi-r.1
for
107916037
ghi-r.1
for
107920157
cit-r.1
for
102607299
vvi-u.5
for
100259613
ppo-u.5
for
18101853
sly-u.5
for
101268001
sot-r.1
for
102580886
nta-r.1
for
107792818
nta-r.1
for
107799545


Ortholog ID: 14009
Species ath bra bna bna ghi ghi cit vvi ppo sly sot nta nta
Symbol AT2G39100 LOC103865701 LOC106447693 LOC106402467 LOC107916037 LOC107920157 LOC102607299 LOC100259613 LOC18101853 LOC101268001 LOC102580886 LOC107792818 LOC107799545
Function* RING/U-box superfamily protein E3 ubiquitin-protein ligase Topors E3 ubiquitin-protein ligase Topors E3 ubiquitin-protein ligase Topors-like E3 ubiquitin-protein ligase Topors E3 ubiquitin-protein ligase Topors uncharacterized LOC102607299 uncharacterized LOC100259613 uncharacterized LOC18101853 uncharacterized LOC101268001 E3 ubiquitin-protein ligase Topors uncharacterized LOC107792818 uncharacterized LOC107799545
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00650 Butanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818496 103865701 106447693 106402467 107916037 107920157 102607299 100259613 18101853 101268001 102580886 107792818 107799545
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