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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101268001   uncharacterized LOC101268001 
 sly-r.6   101268001   uncharacterized LOC101268001 
 sly-m.5   101268001   uncharacterized LOC101268001 
 sot-r.1   102580886   E3 ubiquitin-protein ligase Topors 
 nta-r.1   107792818   uncharacterized LOC107792818 
 nta-r.1   107799545   uncharacterized LOC107799545 
 ath-u.5   AT2G39100   RING/U-box superfamily protein 
 bra-r.6   103865701   E3 ubiquitin-protein ligase Topors 
 vvi-u.5   100259613   uncharacterized LOC100259613 
 ppo-u.5   18101853   uncharacterized LOC18101853 
 ghi-r.1   107916037   E3 ubiquitin-protein ligase Topors 
 ghi-r.1   107920157   E3 ubiquitin-protein ligase Topors 
 bna-r.1   106447693   E3 ubiquitin-protein ligase Topors 
 bna-r.1   106402467   E3 ubiquitin-protein ligase Topors-like 
 cit-r.1   102607299   uncharacterized LOC102607299 

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Top 50 coexpressed genes to 101268001 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101268001 (sly-u.5 coexpression data)

CoexMap"101268001"


slyLOC101268001 | Entrez gene ID : 101268001      
Species sly sot nta ath bra vvi ppo ghi bna cit bdi osa tae zma cre mtr sbi gma hvu
Paralog 3 1 2 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006513 [list] [network] protein monoubiquitination  (4 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (83 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (211 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
Protein XP_004241072.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  extr 1,  pero 1  (predict for XP_004241072.1)
Subcellular
localization
TargetP
other 4  (predict for XP_004241072.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101268001
sly-r.6
for
101268001
sly-m.5
for
101268001
sot-r.1
for
102580886
nta-r.1
for
107792818
nta-r.1
for
107799545
ath-u.5
for
AT2G39100
bra-r.6
for
103865701
vvi-u.5
for
100259613
ppo-u.5
for
18101853
ghi-r.1
for
107916037
ghi-r.1
for
107920157
bna-r.1
for
106447693
bna-r.1
for
106402467
cit-r.1
for
102607299


Ortholog ID: 14009
Species sly sot nta nta ath bra vvi ppo ghi ghi bna bna cit
Symbol LOC101268001 LOC102580886 LOC107792818 LOC107799545 AT2G39100 LOC103865701 LOC100259613 LOC18101853 LOC107916037 LOC107920157 LOC106447693 LOC106402467 LOC102607299
Function* uncharacterized LOC101268001 E3 ubiquitin-protein ligase Topors uncharacterized LOC107792818 uncharacterized LOC107799545 RING/U-box superfamily protein E3 ubiquitin-protein ligase Topors uncharacterized LOC100259613 uncharacterized LOC18101853 E3 ubiquitin-protein ligase Topors E3 ubiquitin-protein ligase Topors E3 ubiquitin-protein ligase Topors E3 ubiquitin-protein ligase Topors-like uncharacterized LOC102607299
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101268001 102580886 107792818 107799545 818496 103865701 100259613 18101853 107916037 107920157 106447693 106402467 102607299
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