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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-u.5   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-r.7   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-e.2   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-m.4.bio   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-m.4.hor   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-m.4.lig   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-m.4.str   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 ath-m.4.tis   GLY1   NAD-dependent glycerol-3-phosphate dehydrogenase family protein 
 bra-r.6   103865827   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 bna-r.1   106391614   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 bna-r.1   106447514   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 ghi-r.1   107962228   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 ghi-r.1   107931593   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 cit-r.1   102609998   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 gma-u.5   100775580   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 ppo-u.5   7494387   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 mtr-u.5   11418749   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 sly-u.5   101253092   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 sot-r.1   102579026   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 nta-r.1   107779866   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 nta-r.1   107825208   glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic 
 osa-u.5   4342770   glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic-like 
 zma-u.5   100383152   Glycerol-3-phosphate dehydrogenase [NAD(+)] 2 chloroplastic 
 tae-r.2   123084772   glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic 
 tae-r.2   123098579   glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic 
 hvu-r.1   123449561   glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic 
 sbi-r.1   8078454   glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic 
 bdi-r.1   100833649   glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic 
 cre-r.1   CHLRE_12g511150v5   uncharacterized protein 

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Top 50 coexpressed genes to GLY1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GLY1 (ath-m.9 coexpression data)

CoexMap"818664"


athGLY1 | Entrez gene ID : 818664      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 9 1 2 2 1 1 1 1 1 1 2 1 1 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
GO BP
GO:0045017 [list] [network] glycerolipid biosynthetic process  (57 genes)  IMP  
GO:0009627 [list] [network] systemic acquired resistance  (68 genes)  IMP  
GO:0046486 [list] [network] glycerolipid metabolic process  (91 genes)  IMP  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_001324723.1 [sequence] [blastp]
NP_001324724.1 [sequence] [blastp]
NP_565939.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3  (predict for NP_001324723.1)
chlo 4,  cyto 4,  mito 1,  plas 1,  pero 1,  mito_plas 1  (predict for NP_001324724.1)
chlo 4,  cyto 4,  mito 1,  plas 1,  pero 1,  mito_plas 1  (predict for NP_565939.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001324723.1)
other 4  (predict for NP_001324724.1)
other 4  (predict for NP_565939.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
GLY1
ath-u.5
for
GLY1
ath-r.7
for
GLY1
ath-e.2
for
GLY1
ath-m.4.bio
for
GLY1
ath-m.4.hor
for
GLY1
ath-m.4.lig
for
GLY1
ath-m.4.str
for
GLY1
ath-m.4.tis
for
GLY1
bra-r.6
for
103865827
bna-r.1
for
106391614
bna-r.1
for
106447514
ghi-r.1
for
107962228
ghi-r.1
for
107931593
cit-r.1
for
102609998
gma-u.5
for
100775580
ppo-u.5
for
7494387
mtr-u.5
for
11418749
sly-u.5
for
101253092
sot-r.1
for
102579026
nta-r.1
for
107779866
nta-r.1
for
107825208
osa-u.5
for
4342770
zma-u.5
for
100383152
tae-r.2
for
123084772
tae-r.2
for
123098579
hvu-r.1
for
123449561
sbi-r.1
for
8078454
bdi-r.1
for
100833649
cre-r.1
for
CHLRE_12g511150v5


Ortholog ID: 11270
Species ath bra bna bna ghi ghi cit gma ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol GLY1 LOC103865827 LOC106391614 LOC106447514 LOC107962228 LOC107931593 LOC102609998 LOC100775580 LOC7494387 LOC11418749 LOC101253092 LOC102579026 LOC107779866 LOC107825208 LOC4342770 LOC100383152 LOC123084772 LOC123098579 LOC123449561 LOC8078454 LOC100833649 CHLRE_12g511150v5
Function* NAD-dependent glycerol-3-phosphate dehydrogenase family protein glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic-like Glycerol-3-phosphate dehydrogenase [NAD(+)] 2 chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic glycerol-3-phosphate dehydrogenase [NAD(+)], chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 3
bna04626 Plant-pathogen interaction 3
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818664 103865827 106391614 106447514 107962228 107931593 102609998 100775580 7494387 11418749 101253092 102579026 107779866 107825208 4342770 100383152 123084772 123098579 123449561 8078454 100833649 5716580
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