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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.5   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT2G46780   RNA-binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103866433   probable RNA-binding protein ARP1 
 bra-r.6   103866305   probable RNA-binding protein ARP1 
 bna-r.1   125574983   probable RNA-binding protein ARP1 
 bna-r.1   106450476   probable RNA-binding protein ARP1 
 bna-r.1   106412218   probable RNA-binding protein ARP1 
 ghi-r.1   107954420   RNA-binding protein 38 
 ghi-r.1   107953004   RNA-binding protein 24-B 
 ghi-r.1   107923693   RNA-binding protein 38 
 cit-r.1   102620234   uncharacterized LOC102620234 
 gma-u.5   100786208   RNA-binding protein 24-B 
 vvi-u.5   104882246   uncharacterized LOC104882246 
 vvi-u.5   100257521   uncharacterized LOC100257521 
 ppo-u.5   7455359   uncharacterized LOC7455359 
 ppo-u.5   7478798   uncharacterized LOC7478798 
 mtr-u.5   25500626   RNA-binding protein 38 

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Top 50 coexpressed genes to AT2G46780 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G46780 (ath-m.9 coexpression data)

CoexMap"819291"


athAT2G46780 | Entrez gene ID : 819291      
Species ath bra bna ghi cit gma vvi ppo mtr sot bdi sly nta osa tae zma cre sbi hvu
Paralog 9 2 3 3 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_001324122.1 [sequence] [blastp]
NP_182201.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001324122.1)
nucl 10  (predict for NP_182201.4)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for NP_001324122.1)
other 8,  mito 4  (predict for NP_182201.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G46780
ath-u.5
for
AT2G46780
ath-r.7
for
AT2G46780
ath-e.2
for
AT2G46780
ath-m.4.bio
for
AT2G46780
ath-m.4.hor
for
AT2G46780
ath-m.4.lig
for
AT2G46780
ath-m.4.str
for
AT2G46780
ath-m.4.tis
for
AT2G46780
bra-r.6
for
103866433
bra-r.6
for
103866305
bna-r.1
for
125574983
bna-r.1
for
106450476
bna-r.1
for
106412218
ghi-r.1
for
107954420
ghi-r.1
for
107953004
ghi-r.1
for
107923693
cit-r.1
for
102620234
gma-u.5
for
100786208
vvi-u.5
for
104882246
vvi-u.5
for
100257521
ppo-u.5
for
7455359
ppo-u.5
for
7478798
mtr-u.5
for
25500626


Ortholog ID: 11949
Species ath bra bra bna bna bna ghi ghi ghi cit gma vvi vvi ppo ppo mtr
Symbol AT2G46780 LOC103866433 LOC103866305 LOC125574983 LOC106450476 LOC106391974 LOC107953004 LOC107923693 LOC107911274 LOC102620234 LOC100786208 LOC104882246 LOC100257521 LOC7455359 LOC7478798 LOC25500626
Function* RNA-binding (RRM/RBD/RNP motifs) family protein probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 probable RNA-binding protein ARP1 RNA-binding protein 24-B RNA-binding protein 38 RNA-binding protein 38 uncharacterized LOC102620234 RNA-binding protein 24-B uncharacterized LOC104882246 uncharacterized LOC100257521 uncharacterized LOC7455359 uncharacterized LOC7478798 RNA-binding protein 38
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
vvi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819291 103866433 103866305 125574983 106450476 106391974 107953004 107923693 107911274 102620234 100786208 104882246 100257521 7455359 7478798 25500626
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