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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   AT2G47330   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103866389   DEAD-box ATP-dependent RNA helicase 24 
 bra-r.6   103860073   DEAD-box ATP-dependent RNA helicase 24 
 bna-r.1   106351504   DEAD-box ATP-dependent RNA helicase 24 
 bna-r.1   106450422   DEAD-box ATP-dependent RNA helicase 24-like 
 bna-r.1   106438322   DEAD-box ATP-dependent RNA helicase 24-like 
 ghi-r.1   107917120   DEAD-box ATP-dependent RNA helicase 24 
 ghi-r.1   107949521   DEAD-box ATP-dependent RNA helicase 24 
 ghi-r.1   107949504   DEAD-box ATP-dependent RNA helicase 24 
 cit-r.1   102609265   DEAD-box ATP-dependent RNA helicase 24 
 gma-u.5   100814854   DEAD-box ATP-dependent RNA helicase 24 
 gma-u.5   100805571   DEAD-box ATP-dependent RNA helicase 24 
 vvi-u.5   100241725   DEAD-box ATP-dependent RNA helicase 24 
 ppo-u.5   7460468   DEAD-box ATP-dependent RNA helicase 24 
 mtr-u.5   11432035   DEAD-box ATP-dependent RNA helicase 24 
 sly-u.5   101264757   DEAD-box ATP-dependent RNA helicase 24 
 sot-r.1   102596658   DEAD-box ATP-dependent RNA helicase 24 
 nta-r.1   107792463   DEAD-box ATP-dependent RNA helicase 24 
 nta-r.1   107807048   DEAD-box ATP-dependent RNA helicase 24 
 osa-u.5   4332617   DEAD-box ATP-dependent RNA helicase 24-like 
 zma-u.5   103634567   DEAD-box ATP-dependent RNA helicase 24 
 zma-u.5   100281205   pre-mRNA-processing ATP-dependent RNA helicase prp-5 
 tae-r.2   123097670   DEAD-box ATP-dependent RNA helicase 24 
 tae-r.2   123092332   DEAD-box ATP-dependent RNA helicase 24 
 tae-r.2   123085675   DEAD-box ATP-dependent RNA helicase 24 
 hvu-r.1   123448815   DEAD-box ATP-dependent RNA helicase 24 
 hvu-r.1   123448817   DEAD-box ATP-dependent RNA helicase 24 
 sbi-r.1   8081075   DEAD-box ATP-dependent RNA helicase 24 
 bdi-r.1   100831375   DEAD-box ATP-dependent RNA helicase 24 
 cre-r.1   CHLRE_12g522850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G47330 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G47330 (ath-m.9 coexpression data)

CoexMap"819346"


athAT2G47330 | Entrez gene ID : 819346      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 1 1 1 2 1 2 3 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03040 [list] [network] Spliceosome (243 genes)
GO BP
GO:0006397 [list] [network] mRNA processing  (185 genes)  IPI  
GO CC
GO:0016604 [list] [network] nuclear body  (91 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (42 genes)  IDA  
Protein NP_566099.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_566099.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_566099.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT2G47330
ath-u.5
for
AT2G47330
ath-r.7
for
AT2G47330
ath-e.2
for
AT2G47330
ath-m.4.bio
for
AT2G47330
ath-m.4.hor
for
AT2G47330
ath-m.4.lig
for
AT2G47330
ath-m.4.str
for
AT2G47330
ath-m.4.tis
for
AT2G47330
bra-r.6
for
103866389
bra-r.6
for
103860073
bna-r.1
for
106351504
bna-r.1
for
106450422
bna-r.1
for
106438322
ghi-r.1
for
107917120
ghi-r.1
for
107949521
ghi-r.1
for
107949504
cit-r.1
for
102609265
gma-u.5
for
100814854
gma-u.5
for
100805571
vvi-u.5
for
100241725
ppo-u.5
for
7460468
mtr-u.5
for
11432035
sly-u.5
for
101264757
sot-r.1
for
102596658
nta-r.1
for
107792463
nta-r.1
for
107807048
osa-u.5
for
4332617
zma-u.5
for
103634567
zma-u.5
for
100281205
tae-r.2
for
123097670
tae-r.2
for
123092332
tae-r.2
for
123085675
hvu-r.1
for
123448815
hvu-r.1
for
123448817
sbi-r.1
for
8081075
bdi-r.1
for
100831375
cre-r.1
for
CHLRE_12g522850v5


Ortholog ID: 6851
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu hvu sbi bdi cre
Symbol AT2G47330 LOC103866389 LOC103860073 LOC106351504 LOC106438322 LOC106437065 LOC107917120 LOC107949504 LOC107917092 LOC102609265 LOC100814854 LOC100805571 LOC100241725 LOC7460468 LOC11432035 LOC101264757 LOC102596658 LOC107792463 LOC107807048 LOC4332617 LOC103634567 LOC100281205 LOC123097670 LOC123092332 LOC123085675 LOC123448815 LOC123448817 LOC8081075 LOC100831375 CHLRE_12g522850v5
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24-like DEAD-box ATP-dependent RNA helicase 24-like DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24-like DEAD-box ATP-dependent RNA helicase 24 pre-mRNA-processing ATP-dependent RNA helicase prp-5 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 DEAD-box ATP-dependent RNA helicase 24 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03020 RNA polymerase 3
tae03008 Ribosome biogenesis in eukaryotes 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03083 Polycomb repressive complex 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819346 103866389 103860073 106351504 106438322 106437065 107917120 107949504 107917092 102609265 100814854 100805571 100241725 7460468 11432035 101264757 102596658 107792463 107807048 4332617 103634567 100281205 123097670 123092332 123085675 123448815 123448817 8081075 100831375 5722547
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