KEGG 03040 Spliceosome

203  ath genes in this database.

List of genes in ath


Shaded genes do not have coexpression data.
For search Locus* Target* Alias Function*
814787 O, Y AT2G02570 nucleic acid binding/RNA binding protein
814913 O, C EMB2816 Small nuclear ribonucleoprotein family protein
815840 O, Y ABH1 ARM repeat superfamily protein
815976 O, C AT2G14870 RNA-binding (RRM/RBD/RNP motifs) family protein
816187 O, N AT2G16860 GCIP-interacting family protein
816366 O, N emb2444 RNA-binding (RRM/RBD/RNP motifs) family protein
816389 M, M AT2G18740 Small nuclear ribonucleoprotein family protein
816925 O, Y SNRNP-G Putative small nuclear ribonucleoprotein G
816995 O, N RSZ22a RNA recognition motif and CCHC-type zinc finger domains containing protein
817507 O, N MAC5B CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
817551 O, Y AT2G30000 PHF5-like protein
817576 O, N U2B'' U2 small nuclear ribonucleoprotein B
817820 O, N AT2G32600 hydroxyproline-rich glycoprotein family protein
817897 O, Y MAC3B MOS4-associated complex 3B
817938 O, Y AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein
818101 O, Y MEE29 helicase domain-containing protein
818186 O, K AT2G36130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
818311 O, N RS2Z33 arginine/serine-rich zinc knuckle-containing protein 33
818455 O, Y AT2G38730 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
818459 O, Y EMB2765 P-loop containing nucleoside triphosphate hydrolases superfamily protein
818660 O, Y AT2G40650 PRP38 family protein
818702 O, N AT2G41020 WW domain-containing protein
818705 O, N AT2G41060 RNA-binding (RRM/RBD/RNP motifs) family protein
818748 C, N LIS WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein
818828 O, Y AT2G42270 U5 small nuclear ribonucleoprotein helicase
818980 C, Y AT2G43770 Transducin/WD40 repeat-like superfamily protein
818985 O, Y LSM6B Small nuclear ribonucleoprotein family protein
819001 O, Y AT2G43960 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
819273 S, N RS31a RNA-binding (RRM/RBD/RNP motifs) family protein
819338 O, Y AT2G47250 RNA helicase family protein
819346 M, N AT2G47330 P-loop containing nucleoside triphosphate hydrolases superfamily protein
819371 O, N U1A spliceosomal protein U1A
819377 O, Y AT2G47640 Small nuclear ribonucleoprotein family protein
819669 O, N AT3G05070 Cwf18 pre-mRNA splicing factor
819745 O, N AT3G05760 C2H2 and C2HC zinc fingers superfamily protein
819825 O, N AT3G06480 DEAD box RNA helicase family protein
819950 O, Y AT3G07590 Small nuclear ribonucleoprotein family protein
820102 O, Y AT3G09440 Heat shock protein 70 (Hsp 70) family protein
820119 O, N AT3G09620 P-loop containing nucleoside triphosphate hydrolases superfamily protein
820323 O, Y AT3G11500 Small nuclear ribonucleoprotein family protein
820369 C, N AT3G11960 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
820438 O, Y HSP70 heat shock protein 70
820510 O, N EMB2769 Cwf15 / Cwc15 cell cycle control family protein
820511 O, Y AT3G13210 crooked neck protein, putative / cell cycle protein
820515 O, Y AT3G13224 RNA-binding (RRM/RBD/RNP motifs) family protein
820559 C, N SCL30A SC35-like splicing factor 30A
820698 O, Y AT3G14700 SART-1 family
820730 O, N AT3G15010 RNA-binding (RRM/RBD/RNP motifs) family protein
820917 O, Y AT3G16650 Transducin/WD40 repeat-like superfamily protein
821116 O, N DRH1 DEAD box RNA helicase 1
821269 O, Y AT3G02710 ARM repeat superfamily protein
821343 O, N MOS4 modifier of snc1,4
821412 O, N AT3G18790 pre-mRNA-splicing factor ISY1-like protein
821504 O, N PRP40B pre-mRNA-processing protein 40B
821513 O, Y EIF4A-III eukaryotic initiation factor 4A-III
821521 O, N PRP40C pre-mRNA-processing protein 40C
821913 O, N AT3G23325 Splicing factor 3B subunit 5/RDS3 complex subunit 10
822264 O, Y AT3G26560 ATP-dependent RNA helicase
822382 O, C AT3G27600 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
823738 O, N AT3G45950 Pre-mRNA splicing Prp18-interacting factor
824105 O, N SR34a SER/ARG-rich protein 34A
824230 C, N U1-70K U1 small nuclear ribonucleoprotein-70K
824518 O, N RS2Z32 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein
824686 S, N SAP130a Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
824688 S, N SAP130b Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
824712 M, C SCL30 SC35-like splicing factor 30
824759 O, Y AT3G55930 pre-mRNA-splicing factor
824853 O, N UBA2A UBP1-associated protein 2A
825150 O, Y LSM6A Small nuclear ribonucleoprotein family protein
825359 O, N RS31 RNA-binding (RRM/RBD/RNP motifs) family protein
825404 O, Y AT3G62310 RNA helicase family protein
825459 O, Y AT3G62840 Small nuclear ribonucleoprotein family protein
826439 C, N AT4G01020 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein
826602 O, N AT4G10110 RNA-binding (RRM/RBD/RNP motifs) family protein
826873 O, Y AT4G12600 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
827077 O, N AT4G14342 Splicing factor 3B subunit 5/RDS3 complex subunit 10
827272 O, N PRL1 pleiotropic regulatory locus 1
827313 O, N AT4G16200 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
827370 O, Y AT4G16680 P-loop containing nucleoside triphosphate hydrolases superfamily protein
827792 M, C smB small nuclear ribonucleoprotein associated protein B
827859 O, N AT4G21110 G10 family protein
827925 O, Y EMB2770 pre-mRNA splicing factor-like protein
828027 S, N SR34b RNA-binding (RRM/RBD/RNP motifs) family protein
828071 O, N AT4G03120 C2H2 and C2HC zinc fingers superfamily protein
828163 O, Y AT4G02840 Small nuclear ribonucleoprotein family protein
828253 C, N AT4G21660 proline-rich spliceosome-associated (PSP) family protein
828330 O, N AT4G22350 Ubiquitin C-terminal hydrolases superfamily protein
828333 O, Y AT4G22380 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
828336 S, Y AT4G22410 U4/U6.U5 tri-snRNP-associated-like protein
828531 C, C cpHsc70-1 chloroplast heat shock protein 70-1
828654 O, N RS40 arginine/serine-rich splicing factor 35
829145 O, C RUXF small nuclear ribonucleoprotein F
829156 M, M AT4G30330 Small nuclear ribonucleoprotein family protein
829285 O, N RSZ22 serine/arginine-rich 22
829732 C, N AT4G35785 RNA-binding (RRM/RBD/RNP motifs) family protein
829822 O, N ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor
829866 O, N SMP2 Pre-mRNA splicing Prp18-interacting factor
830033 O, Y AT4G38780 pre-mRNA-processing-splicing factor-like protein
830123 O, N AT4G39680 SAP domain-containing protein
830503 O, Y ATO splicing factor-like protein
830540 O, N AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
830725 S, Y YLS8 mRNA splicing factor, thioredoxin-like U5 snRNP
830846 O, Y THO1 nuclear matrix protein-like protein
830901 C, N AT5G10370 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein
830947 O, N AT5G10800 RNA recognition motif (RRM)-containing protein
830986 O, Y UAP56a DEAD/DEAH box RNA helicase family protein
830990 O, C UAP56b DEAD/DEAH box RNA helicase family protein
831020 O, Y HSC70-1 heat shock cognate protein 70-1
831092 M, C AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein
831141 O, N EMB3011 RNA helicase family protein
831313 O, N AT5G14610 DEAD box RNA helicase family protein
831342 O, C AT5G14900 helicase associated (HA2) domain-containing protein
831541 O, N DOT2 SART-1 family
831856 O, Y Hsp70-2 Heat shock protein 70 (Hsp 70) family protein
831923 O, M AT5G02530 RNA-binding (RRM/RBD/RNP motifs) family protein
831999 C, N SCL28 SC35-like splicing factor 28
832138 O, N AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
832577 O, N RRC1 RNA recognition motif (RRM)-containing protein
832594 O, Y AT5G25230 Ribosomal protein S5/Elongation factor G/III/V family protein
832834 O, Y emb1644 Small nuclear ribonucleoprotein family protein
832986 O, Y AT5G28740 Tetratricopeptide repeat (TPR)-like superfamily protein
833711 O, Y ATSRL1 PRP38 family protein
833750 C, N ALY4 ALWAYS EARLY 4
834047 M, Y AT5G40490 RNA-binding (RRM/RBD/RNP motifs) family protein
834182 O, Y AT5G41770 crooked neck protein, putative / cell cycle protein
834293 O, N U2AF35B Zinc finger C-x8-C-x5-C-x3-H type family protein
834443 M, N CBP20 CAP-binding protein 20
834477 M, M AT5G44500 Small nuclear ribonucleoprotein family protein
834639 O, Y AT5G45990 crooked neck protein, putative / cell cycle protein
834945 O, Y SAD1 Small nuclear ribonucleoprotein family protein
835054 C, C cpHsc70-2 chloroplast heat shock protein 70-2
835279 O, N RS41 RNA-binding (RRM/RBD/RNP motifs) family protein
835712 O, N TEX1 Transducin/WD40 repeat-like superfamily protein
835843 O, N AT5G57370 U4/U6.U5 small nuclear ribonucleoprotein
835960 O, N TAF15b TBP-associated factor 15B
836117 C, N AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein
836224 M, C GR-RBP3 glycine-rich RNA-binding protein 3
836432 M, Y AT5G63120 P-loop containing nucleoside triphosphate hydrolases superfamily protein
836541 O, N SC35 serine/arginine-rich splicing factor-like protein, putative
836548 O, P AT5G64270 splicing factor
837131 O, Y MEE5 Ribosomal protein S5/Elongation factor G/III/V family protein
837206 M, C AT1G06960 RNA-binding (RRM/RBD/RNP motifs) family protein
837228 O, Y AT1G07170 PHF5-like protein
837248 O, N MAC5A CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein
837433 O, Y SR30 SERINE-ARGININE PROTEIN 30
837505 O, Y U2A' U2 small nuclear ribonucleoprotein A
837506 O, Y CDC5 cell division cycle 5
837560 O, Y MAGO mago nashi family protein
837599 O, N AT1G10580 Transducin/WD40 repeat-like superfamily protein
838026 O, Y AT1G14640 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
838027 O, N AT1G14650 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein
838174 O, Y Hsp70b heat shock protein 70B
838341 O, N AT1G17640 RNA-binding (RRM/RBD/RNP motifs) family protein
838647 O, Y AT1G20580 Small nuclear ribonucleoprotein family protein
838685 O, Y AT1G20920 P-loop containing nucleoside triphosphate hydrolases superfamily protein
838690 M, Y emb1507 U5 small nuclear ribonucleoprotein helicase
838714 O, Y LSM3A Small nuclear ribonucleoprotein family protein
838997 O, N RSZ21 RS-containing zinc finger protein 21
839081 O, N THO2 THO2
839179 C, C AT1G26370 RNA helicase family protein
839262 O, N SR34 RNA-binding (RRM/RBD/RNP motifs) family protein
839503 O, N MAC3A MOS4-associated complex 3A
839526 O, Y LSM2 Small nuclear ribonucleoprotein family protein
839567 O, N AT1G03140 splicing factor Prp18 family protein
839657 O, N ATU2AF35A U2 snRNP auxiliary factor small subunit
839683 O, Y AT1G27900 RNA helicase family protein
839699 O, N AT1G28060 Pre-mRNA-splicing factor 3
839927 C, N DRT111 D111/G-patch domain-containing protein
840143 S, Y ESP3 RNA helicase family protein
841057 C, C PRP40A pre-mRNA-processing protein 40A
841562 O, Y AT1G51380 DEA(D/H)-box RNA helicase family protein
841576 O, N Y14 RNA-binding (RRM/RBD/RNP motifs) family protein
841901 O, N AT1G54590 pre-mRNA-splicing factor-like protein
841958 O, N RH20 DEA(D/H)-box RNA helicase family protein
841976 C, N SCL33 SC35-like splicing factor 33
842094 O, Y ERD2 heat shock protein 70 (Hsp 70) family protein
842312 O, C emb1220 pre-mRNA processing ribonucleoprotein binding region-containing protein
842315 M, C AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein
842376 O, C AT1G60830 RNA-binding (RRM/RBD/RNP motifs) family protein
842382 O, N AT1G60900 U2 snRNP auxilliary factor, large subunit, splicing factor
842877 O, N SMP1 Pre-mRNA splicing Prp18-interacting factor
842881 O, Y LSM8 Small nuclear ribonucleoprotein family protein
842943 O, N AT1G66260 RNA-binding (RRM/RBD/RNP motifs) family protein
843763 M, C GR-RBP5 glycine-rich RNA-binding protein 5
843963 O, Y SmD3 snRNP core protein SMD3
844021 O, Y LSM3B Small nuclear ribonucleoprotein family protein
844055 O, N SKIP chromatin protein family
844347 C, Y SUS2 Pre-mRNA-processing-splicing factor
2745945 O, C AT3G44785 Zinc finger C-x8-C-x5-C-x3-H type family protein
3766679 , U1.5
3766805 O, Y AT1G28180 DEAD-box ATP-dependent RNA helicase-like protein
3768861 , U6-26
3769727 , U2.6
5007874 O, C AT2G14285 Small nuclear ribonucleoprotein family protein
5008155 O, N AT4G22285 Ubiquitin C-terminal hydrolases superfamily protein
6240821 , AT1G70185
28716203 , U4.6
28717567 , U2.10
28718958 , U4.2
28719576 , U6.4
28720012 , U6.5
28720607 , U4.5
28720624 , U1.9


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