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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-u.5   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-r.7   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-e.2   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.bio   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.hor   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.lig   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.str   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-m.4.tis   AT3G15140   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 bra-r.6   103869953   uncharacterized exonuclease domain-containing protein At3g15140 
 bna-r.1   111206250   uncharacterized exonuclease domain-containing protein At3g15140 
 bna-r.1   BNAC05G38480D   uncharacterized exonuclease domain-containing protein At3g15140 
 ghi-r.1   107939189   uncharacterized exonuclease domain-containing protein At3g15140 
 cit-r.1   102619240   hypothetical protein 
 gma-u.5   100781573   uncharacterized exonuclease domain-containing protein At3g15140 
 vvi-u.5   100248650   uncharacterized exonuclease domain-containing protein At3g15140 
 ppo-u.5   7470965   uncharacterized exonuclease domain-containing protein At3g15140 
 mtr-u.5   11426353   uncharacterized exonuclease domain-containing protein At3g15140 
 sly-u.5   101262330   uncharacterized exonuclease domain-containing protein At3g15140 
 sot-r.1   102599487   uncharacterized exonuclease domain-containing protein At3g15140 
 nta-r.1   107813589   putative exonuclease domain-containing protein At3g15140 
 nta-r.1   107767783   putative exonuclease domain-containing protein At3g15140 
 osa-u.5   9267223   uncharacterized exonuclease domain-containing protein At3g15140 
 zma-u.5   100193112   uncharacterized LOC100193112 
 tae-r.2   123160333   uncharacterized exonuclease domain-containing protein At3g15140 
 tae-r.2   123165645   uncharacterized exonuclease domain-containing protein At3g15140 
 tae-r.2   123147819   uncharacterized exonuclease domain-containing protein At3g15140 
 hvu-r.1   123409951   uncharacterized exonuclease domain-containing protein At3g15140 
 sbi-r.1   8072906   uncharacterized exonuclease domain-containing protein At3g15140 
 bdi-r.1   100840031   uncharacterized exonuclease domain-containing protein At3g15140 

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Top 50 coexpressed genes to AT3G15140 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G15140 (ath-m.9 coexpression data)

CoexMap"820745"


athAT3G15140 | Entrez gene ID : 820745      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 1 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0035194 [list] [network] regulatory ncRNA-mediated post-transcriptional gene silencing  (93 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (13 genes)  IEA  
GO:0016891 [list] [network] RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism  (61 genes)  IMP  
GO:0003676 [list] [network] nucleic acid binding  (3104 genes)  IEA  
Protein NP_001327308.1 [sequence] [blastp]
NP_566502.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 1,  nucl 1,  extr 1,  cyto 1,  E.R. 1,  pero 1,  cysk_nucl 1,  nucl_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001327308.1)
chlo 4,  mito 3,  vacu 1,  cyto_mito 1  (predict for NP_566502.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for NP_001327308.1)
chlo 7,  mito 4  (predict for NP_566502.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G15140
ath-u.5
for
AT3G15140
ath-r.7
for
AT3G15140
ath-e.2
for
AT3G15140
ath-m.4.bio
for
AT3G15140
ath-m.4.hor
for
AT3G15140
ath-m.4.lig
for
AT3G15140
ath-m.4.str
for
AT3G15140
ath-m.4.tis
for
AT3G15140
bra-r.6
for
103869953
bna-r.1
for
111206250
bna-r.1
for
BNAC05G38480D
ghi-r.1
for
107939189
cit-r.1
for
102619240
gma-u.5
for
100781573
vvi-u.5
for
100248650
ppo-u.5
for
7470965
mtr-u.5
for
11426353
sly-u.5
for
101262330
sot-r.1
for
102599487
nta-r.1
for
107813589
nta-r.1
for
107767783
osa-u.5
for
9267223
zma-u.5
for
100193112
tae-r.2
for
123160333
tae-r.2
for
123165645
tae-r.2
for
123147819
hvu-r.1
for
123409951
sbi-r.1
for
8072906
bdi-r.1
for
100840031


Ortholog ID: 11678
Species ath bra bna bna ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G15140 LOC103869953 LOC111206250 BNAC05G38480D LOC107939189 LOC102619240 LOC100781573 LOC100248650 LOC7470965 LOC11426353 LOC101262330 LOC102599487 LOC107813589 LOC107767783 LOC9267223 LOC100193112 LOC123160333 LOC123165645 LOC123147819 LOC123409951 LOC8072906 LOC100840031
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 hypothetical protein uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 putative exonuclease domain-containing protein At3g15140 putative exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized LOC100193112 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140 uncharacterized exonuclease domain-containing protein At3g15140
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00330 Arginine and proline metabolism 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00270 Cysteine and methionine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820745 103869953 111206250 106397316 107939189 102619240 100781573 100248650 7470965 11426353 101262330 102599487 107813589 107767783 9267223 100193112 123160333 123165645 123147819 123409951 8072906 100840031
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