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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G16780   Ribosomal protein L19e family protein 
 ath-u.5   AT3G16780   Ribosomal protein L19e family protein 
 ath-r.7   AT3G16780   Ribosomal protein L19e family protein 
 ath-e.2   AT3G16780   Ribosomal protein L19e family protein 
 ath-m.4.bio   AT3G16780   Ribosomal protein L19e family protein 
 ath-m.4.hor   AT3G16780   Ribosomal protein L19e family protein 
 ath-m.4.lig   AT3G16780   Ribosomal protein L19e family protein 
 ath-m.4.str   AT3G16780   Ribosomal protein L19e family protein 
 ath-m.4.tis   AT3G16780   Ribosomal protein L19e family protein 
 ath-u.5   AT4G02230   Ribosomal protein L19e family protein 
 ath-u.5   emb2386   Ribosomal protein L19e family protein 
 bra-r.6   103844564   60S ribosomal protein L19-1 
 bra-r.6   103843738   60S ribosomal protein L19-1 
 bra-r.6   103836766   60S ribosomal protein L19-1 
 bna-r.1   106438669   60S ribosomal protein L19-3-like 
 bna-r.1   106365507   60S ribosomal protein L19-1 
 bna-r.1   106345279   60S ribosomal protein L19-1 
 ghi-r.1   107896649   60S ribosomal protein L19-2 
 ghi-r.1   107908523   60S ribosomal protein L19-1 
 ghi-r.1   107912357   60S ribosomal protein L19-1 
 cit-r.1   102627110   60S ribosomal protein L19-1 
 cit-r.1   102616399   60S ribosomal protein L19-2 
 gma-u.5   100499883   uncharacterized LOC100499883 
 gma-u.5   100818880   60S ribosomal protein L19 
 gma-u.5   100816734   60S ribosomal protein L19-3 
 vvi-u.5   100246855   60S ribosomal protein L19-like 
 vvi-u.5   100267158   60S ribosomal protein L19-like 
 ppo-u.5   7493602   60S ribosomal protein L19-3 
 ppo-u.5   18106534   60S ribosomal protein L19-3 
 ppo-u.5   18105615   60S ribosomal protein L19-1 
 mtr-u.5   25499619   60S ribosomal protein L19-3 
 mtr-u.5   11420015   60S ribosomal protein L19-3 
 sly-u.5   101261236   large ribosomal subunit protein eL19y 
 sly-u.5   101265769   large ribosomal subunit protein eL19y 
 sot-r.1   102578588   60S ribosomal protein L19-3-like 
 sot-r.1   102577496   60S ribosomal protein L19-like protein 
 nta-r.1   107759916   large ribosomal subunit protein eL19y 
 nta-r.1   107831514   large ribosomal subunit protein eL19z 
 nta-r.1   107795950   large ribosomal subunit protein eL19y-like 
 osa-u.5   4333317   large ribosomal subunit protein eL19x 
 osa-u.5   4332773   large ribosomal subunit protein eL19x 
 zma-u.5   100284115   60S ribosomal protein L19-3 
 zma-u.5   100282430   60S ribosomal protein L19-3 
 zma-u.5   542284   60S ribosomal protein L19-3 
 tae-r.2   123051453   60S ribosomal protein L19-1 
 tae-r.2   543436   60S ribosomal protein L19-1 
 hvu-r.1   123424734   60S ribosomal protein L19-1-like 
 hvu-r.1   123448684   60S ribosomal protein L19-3-like 
 sbi-r.1   8077289   60S ribosomal protein L19-1 
 sbi-r.1   8078633   60S ribosomal protein L19-1 
 sbi-r.1   8076075   60S ribosomal protein L19-1 
 bdi-r.1   100831315   60S ribosomal protein L19-1 
 bdi-r.1   100821238   60S ribosomal protein L19-3 
 cre-r.1   CHLRE_02g075700v5   ribosomal protein L19 

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Top 50 coexpressed genes to AT3G16780 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G16780 (ath-m.9 coexpression data)

CoexMap"820931"


athAT3G16780 | Entrez gene ID : 820931      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 3 2 3 2 2 2 3 2 3 2 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_188300.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 4  (predict for NP_188300.1)
Subcellular
localization
TargetP
other 5  (predict for NP_188300.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G16780
ath-u.5
for
AT3G16780
ath-r.7
for
AT3G16780
ath-e.2
for
AT3G16780
ath-m.4.bio
for
AT3G16780
ath-m.4.hor
for
AT3G16780
ath-m.4.lig
for
AT3G16780
ath-m.4.str
for
AT3G16780
ath-m.4.tis
for
AT3G16780
ath-u.5
for
AT4G02230
ath-u.5
for
emb2386
bra-r.6
for
103844564
bra-r.6
for
103843738
bra-r.6
for
103836766
bna-r.1
for
106438669
bna-r.1
for
106365507
bna-r.1
for
106345279
ghi-r.1
for
107896649
ghi-r.1
for
107908523
ghi-r.1
for
107912357
cit-r.1
for
102627110
cit-r.1
for
102616399
gma-u.5
for
100499883
gma-u.5
for
100818880
gma-u.5
for
100816734
vvi-u.5
for
100246855
vvi-u.5
for
100267158
ppo-u.5
for
7493602
ppo-u.5
for
18106534
ppo-u.5
for
18105615
mtr-u.5
for
25499619
mtr-u.5
for
11420015
sly-u.5
for
101261236
sly-u.5
for
101265769
sot-r.1
for
102578588
sot-r.1
for
102577496
nta-r.1
for
107759916
nta-r.1
for
107831514
nta-r.1
for
107795950
osa-u.5
for
4333317
osa-u.5
for
4332773
zma-u.5
for
100284115
zma-u.5
for
100282430
zma-u.5
for
542284
tae-r.2
for
123051453
tae-r.2
for
543436
hvu-r.1
for
123424734
hvu-r.1
for
123448684
sbi-r.1
for
8077289
sbi-r.1
for
8078633
sbi-r.1
for
8076075
bdi-r.1
for
100831315
bdi-r.1
for
100821238
cre-r.1
for
CHLRE_02g075700v5


Ortholog ID: 1504
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol AT3G16780 AT4G02230 emb2386 LOC103843738 LOC103836766 LOC103858770 LOC106438669 LOC106345279 LOC106369297 LOC107926554 LOC107933243 LOC107946056 LOC102627110 LOC102616399 LOC100816734 LOC100527501 LOC100499875 LOC100246855 LOC100267158 LOC18105615 LOC7485196 LOC7462506 LOC25499619 LOC11420015 LOC101261236 LOC101265769 LOC102578588 LOC102577496 LOC107759916 LOC107764242 LOC142179337 LOC4333317 LOC4332773 LOC100282430 LOC542284 LOC100216841 LOC123051572 LOC123187503 LOC123424734 LOC123448684 LOC8077289 LOC8078633 LOC8076075 LOC100831315 LOC100821238 CHLRE_02g075700v5
Function* Ribosomal protein L19e family protein Ribosomal protein L19e family protein Ribosomal protein L19e family protein 60S ribosomal protein L19-1 60S ribosomal protein L19-1 60S ribosomal protein L19-3 60S ribosomal protein L19-3-like 60S ribosomal protein L19-1 60S ribosomal protein L19-1 60S ribosomal protein L19-2 60S ribosomal protein L19-1 60S ribosomal protein L19-2 60S ribosomal protein L19-1 60S ribosomal protein L19-2 60S ribosomal protein L19-3 uncharacterized LOC100527501 uncharacterized LOC100499875 60S ribosomal protein L19-like 60S ribosomal protein L19-like 60S ribosomal protein L19-1 60S ribosomal protein L19-3 60S ribosomal protein L19-1 60S ribosomal protein L19-3 60S ribosomal protein L19-3 large ribosomal subunit protein eL19y large ribosomal subunit protein eL19y 60S ribosomal protein L19-3-like 60S ribosomal protein L19-like protein large ribosomal subunit protein eL19y large ribosomal subunit protein eL19y large ribosomal subunit protein eL19y-like large ribosomal subunit protein eL19x large ribosomal subunit protein eL19x 60S ribosomal protein L19-3 60S ribosomal protein L19-3 Ribosomal protein L19 60S ribosomal protein L19-1 60S ribosomal protein L19-1 60S ribosomal protein L19-1-like 60S ribosomal protein L19-3-like 60S ribosomal protein L19-1 60S ribosomal protein L19-1 60S ribosomal protein L19-1 60S ribosomal protein L19-1 60S ribosomal protein L19-3 ribosomal protein L19
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma01240 Biosynthesis of cofactors 3
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03008 Ribosome biogenesis in eukaryotes 6
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 9
zma03008 Ribosome biogenesis in eukaryotes 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi01230 Biosynthesis of amino acids 4
bdi00220 Arginine biosynthesis 2
bdi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820931 828099 839407 103843738 103836766 103858770 106438669 106345279 106369297 107926554 107933243 107946056 102627110 102616399 100816734 100527501 100499875 100246855 100267158 18105615 7485196 7462506 25499619 11420015 101261236 101265769 102578588 102577496 107759916 107764242 142179337 4333317 4332773 100282430 542284 100216841 123051572 123187503 123424734 123448684 8077289 8078633 8076075 100831315 100821238 5727201
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