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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MYB4R1   myb domain protein 4r1 
 ath-u.5   MYB4R1   myb domain protein 4r1 
 ath-r.7   MYB4R1   myb domain protein 4r1 
 ath-e.2   MYB4R1   myb domain protein 4r1 
 ath-m.4.bio   MYB4R1   myb domain protein 4r1 
 ath-m.4.hor   MYB4R1   myb domain protein 4r1 
 ath-m.4.lig   MYB4R1   myb domain protein 4r1 
 ath-m.4.str   MYB4R1   myb domain protein 4r1 
 ath-m.4.tis   MYB4R1   myb domain protein 4r1 
 bra-r.6   103869609   myb-like protein L 
 bna-r.1   106390124   myb-like protein L 
 bna-r.1   106390131   myb-like protein L 
 ghi-r.1   107941458   uncharacterized LOC107941458 
 ghi-r.1   107931053   uncharacterized LOC107931053 
 cit-r.1   102610651   uncharacterized LOC102610651 
 gma-u.5   778073   uncharacterized LOC778073 
 gma-u.5   100818474   uncharacterized LOC100818474 
 vvi-u.5   100268025   uncharacterized LOC100268025 
 ppo-u.5   7462515   uncharacterized LOC7462515 
 mtr-u.5   25496770   uncharacterized LOC25496770 
 sly-u.5   101267796   uncharacterized LOC101267796 
 sot-r.1   102578376   uncharacterized LOC102578376 
 nta-r.1   107784678   uncharacterized LOC107784678 
 nta-r.1   107803091   uncharacterized LOC107803091 
 osa-u.5   4342365   uncharacterized LOC4342365 
 zma-u.5   103631936   myb domain protein 4r1 
 tae-r.2   123122106   uncharacterized LOC123122106 
 tae-r.2   123112617   uncharacterized LOC123112617 
 tae-r.2   123104333   myb-like protein L 
 hvu-r.1   123399813   uncharacterized LOC123399813 
 sbi-r.1   8086395   myb-like protein L 
 bdi-r.1   100828457   snRNA-activating protein complex subunit 4 
 cre-r.1   CHLRE_17g714229v5   uncharacterized protein 

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Top 50 coexpressed genes to MYB4R1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MYB4R1 (ath-m.9 coexpression data)

CoexMap"821335"


athMYB4R1 | Entrez gene ID : 821335      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001189922.1 [sequence] [blastp]
NP_001327710.1 [sequence] [blastp]
NP_566597.1 [sequence] [blastp]
NP_850607.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_001189922.1)
nucl 10  (predict for NP_001327710.1)
nucl 9  (predict for NP_566597.1)
nucl 9,  pero 1,  cysk 1  (predict for NP_850607.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001189922.1)
other 6,  chlo 5  (predict for NP_001327710.1)
other 9  (predict for NP_566597.1)
chlo 3  (predict for NP_850607.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MYB4R1
ath-u.5
for
MYB4R1
ath-r.7
for
MYB4R1
ath-e.2
for
MYB4R1
ath-m.4.bio
for
MYB4R1
ath-m.4.hor
for
MYB4R1
ath-m.4.lig
for
MYB4R1
ath-m.4.str
for
MYB4R1
ath-m.4.tis
for
MYB4R1
bra-r.6
for
103869609
bna-r.1
for
106390124
bna-r.1
for
106390131
ghi-r.1
for
107941458
ghi-r.1
for
107931053
cit-r.1
for
102610651
gma-u.5
for
778073
gma-u.5
for
100818474
vvi-u.5
for
100268025
ppo-u.5
for
7462515
mtr-u.5
for
25496770
sly-u.5
for
101267796
sot-r.1
for
102578376
nta-r.1
for
107784678
nta-r.1
for
107803091
osa-u.5
for
4342365
zma-u.5
for
103631936
tae-r.2
for
123122106
tae-r.2
for
123112617
tae-r.2
for
123104333
hvu-r.1
for
123399813
sbi-r.1
for
8086395
bdi-r.1
for
100828457
cre-r.1
for
CHLRE_17g714229v5


Ortholog ID: 8015
Species ath bra bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol MYB4R1 LOC103869609 LOC106390124 LOC107941458 LOC107931053 LOC102610651 LOC778073 LOC100818474 LOC100268025 LOC7462515 LOC25496770 LOC101267796 LOC102578376 LOC107784678 LOC107803091 LOC4342365 LOC103631936 LOC123122106 LOC123112617 LOC123104333 LOC123399813 LOC8086395 LOC100828457 CHLRE_17g714229v5
Function* myb domain protein 4r1 myb-like protein L myb-like protein L uncharacterized LOC107941458 uncharacterized LOC107931053 uncharacterized LOC102610651 uncharacterized LOC778073 uncharacterized LOC100818474 uncharacterized LOC100268025 uncharacterized LOC7462515 uncharacterized LOC25496770 uncharacterized LOC101267796 uncharacterized LOC102578376 uncharacterized LOC107784678 uncharacterized LOC107803091 uncharacterized LOC4342365 myb domain protein 4r1 uncharacterized LOC123122106 uncharacterized LOC123112617 myb-like protein L uncharacterized LOC123399813 myb-like protein L snRNA-activating protein complex subunit 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03015 mRNA surveillance pathway 4
tae03040 Spliceosome 3
tae03030 DNA replication 2
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821335 103869609 106390124 107941458 107931053 102610651 778073 100818474 100268025 7462515 25496770 101267796 102578376 107784678 107803091 4342365 103631936 123122106 123112617 123104333 123399813 8086395 100828457 66056981
The preparation time of this page was 1.6 [sec].