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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107931053   uncharacterized LOC107931053 
 ath-u.5   MYB4R1   myb domain protein 4r1 
 gma-u.5   778073   uncharacterized LOC778073 
 gma-u.5   100818474   uncharacterized LOC100818474 
 vvi-u.5   100268025   uncharacterized LOC100268025 
 ppo-u.5   7462515   uncharacterized LOC7462515 
 mtr-u.5   25496770   uncharacterized LOC25496770 
 sly-u.5   101267796   uncharacterized LOC101267796 
 osa-u.5   4342365   uncharacterized LOC4342365 
 zma-u.5   103631936   myb domain protein 4r1 

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Top 50 coexpressed genes to 107931053 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107931053 (ghi-r.1 coexpression data)

CoexMap"107931053"


ghiLOC107931053 | Entrez gene ID : 107931053    
Species ghi ath gma vvi ppo mtr sly osa zma tae hvu bdi cit bra cre sbi bna nta sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042795 [list] [network] snRNA transcription by RNA polymerase II  (7 genes)  IEA  
GO:0042796 [list] [network] snRNA transcription by RNA polymerase III  (7 genes)  IEA  
GO CC
GO:0019185 [list] [network] snRNA-activating protein complex  (7 genes)  IEA  
GO MF
GO:0001006 [list] [network] RNA polymerase III type 3 promoter sequence-specific DNA binding  (9 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
Protein XP_016718327.1 [sequence] [blastp]
XP_016718328.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016718327.1)
nucl 9,  mito 1,  cysk 1  (predict for XP_016718328.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016718327.1)
chlo 4,  mito 3  (predict for XP_016718328.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107931053

.
ath-u.5
for
MYB4R1

.
gma-u.5
for
778073

.
gma-u.5
for
100818474

.
vvi-u.5
for
100268025

.
ppo-u.5
for
7462515

.
mtr-u.5
for
25496770

.
sly-u.5
for
101267796

.
osa-u.5
for
4342365

.
zma-u.5
for
103631936

.


Ortholog ID: 8015
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi cre sbi sot cit bdi nta nta
Symbol MYB4R1 LOC100818474 LOC778073 LOC101267796 LOC4342365 LOC103631936 LOC103869609 LOC100268025 LOC7462515 LOC25496770 LOC123104333 LOC123112617 LOC123399813 LOC107941458 LOC107931053 CHLRE_17g714229v5 LOC8086395 LOC102578376 LOC102610651 LOC100828457 LOC107803091 LOC107784678
Function* myb domain protein 4r1 uncharacterized LOC100818474 uncharacterized LOC778073 uncharacterized LOC101267796 uncharacterized LOC4342365 myb domain protein 4r1 myb-like protein L uncharacterized LOC100268025 uncharacterized LOC7462515 uncharacterized LOC25496770 myb-like protein L uncharacterized LOC123112617 uncharacterized LOC123399813 uncharacterized LOC107941458 uncharacterized LOC107931053 uncharacterized protein myb-like protein L uncharacterized LOC102578376 uncharacterized LOC102610651 snRNA-activating protein complex subunit 4 uncharacterized LOC107803091 uncharacterized LOC107784678
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821335 100818474 778073 101267796 4342365 103631936 103869609 100268025 7462515 25496770 123104333 123112617 123399813 107941458 107931053 66056981 8086395 102578376 102610651 100828457 107803091 107784678
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