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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-u.5   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-r.7   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-e.2   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.bio   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.hor   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.lig   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.str   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.tis   AT3G20230   Ribosomal L18p/L5e family protein 
 bra-r.6   103869346   50S ribosomal protein L18 
 bna-r.1   125608835   50S ribosomal protein L18-like 
 bna-r.1   106428871   50S ribosomal protein L18 
 bna-r.1   106399284   50S ribosomal protein L18-like 
 ghi-r.1   107910140   50S ribosomal protein L18 
 ghi-r.1   107887353   50S ribosomal protein L18 
 cit-r.1   102617749   uncharacterized LOC102617749 
 gma-u.5   100820550   putative L18p/L5e ribosomal protein 
 gma-u.5   100803727   50S ribosomal protein L18 
 vvi-u.5   100246602   uncharacterized LOC100246602 
 ppo-u.5   7467411   uncharacterized LOC7467411 
 ppo-u.5   18104417   uncharacterized LOC18104417 
 mtr-u.5   11429855   50S ribosomal protein L18 
 sly-u.5   101268800   uncharacterized LOC101268800 
 sot-r.1   102581110   50S ribosomal protein L18 
 nta-r.1   107800177   uncharacterized LOC107800177 
 nta-r.1   107773519   uncharacterized LOC107773519 
 osa-u.5   4330370   uncharacterized LOC4330370 
 zma-u.5   103627570   uncharacterized LOC103627570 
 tae-r.2   123137819   39S ribosomal protein L18, mitochondrial 
 tae-r.2   123145133   39S ribosomal protein L18, mitochondrial 
 tae-r.2   123128040   39S ribosomal protein L18, mitochondrial 
 hvu-r.1   123401770   39S ribosomal protein L18, mitochondrial 
 sbi-r.1   110434343   50S ribosomal protein L18 
 bdi-r.1   100829705   50S ribosomal protein L18 

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Top 50 coexpressed genes to AT3G20230 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G20230 (ath-m.9 coexpression data)

CoexMap"821567"


athAT3G20230 | Entrez gene ID : 821567      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_566655.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  vacu 1  (predict for NP_566655.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_566655.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G20230
ath-u.5
for
AT3G20230
ath-r.7
for
AT3G20230
ath-e.2
for
AT3G20230
ath-m.4.bio
for
AT3G20230
ath-m.4.hor
for
AT3G20230
ath-m.4.lig
for
AT3G20230
ath-m.4.str
for
AT3G20230
ath-m.4.tis
for
AT3G20230
bra-r.6
for
103869346
bna-r.1
for
125608835
bna-r.1
for
106428871
bna-r.1
for
106399284
ghi-r.1
for
107910140
ghi-r.1
for
107887353
cit-r.1
for
102617749
gma-u.5
for
100820550
gma-u.5
for
100803727
vvi-u.5
for
100246602
ppo-u.5
for
7467411
ppo-u.5
for
18104417
mtr-u.5
for
11429855
sly-u.5
for
101268800
sot-r.1
for
102581110
nta-r.1
for
107800177
nta-r.1
for
107773519
osa-u.5
for
4330370
zma-u.5
for
103627570
tae-r.2
for
123137819
tae-r.2
for
123145133
tae-r.2
for
123128040
hvu-r.1
for
123401770
sbi-r.1
for
110434343
bdi-r.1
for
100829705


Ortholog ID: 9496
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT3G20230 LOC103869346 LOC125608835 LOC106428871 LOC106399284 LOC107910140 LOC107887353 LOC102617749 LOC100820550 LOC100803727 LOC100246602 LOC7467411 LOC18104417 LOC11429855 LOC101268800 LOC102581110 LOC107800177 LOC107773519 LOC4330370 LOC103627570 LOC123137819 LOC123145133 LOC123128040 LOC123401770 LOC110434343 LOC100829705
Function* Ribosomal L18p/L5e family protein 50S ribosomal protein L18 50S ribosomal protein L18-like 50S ribosomal protein L18 50S ribosomal protein L18-like 50S ribosomal protein L18 50S ribosomal protein L18 uncharacterized LOC102617749 putative L18p/L5e ribosomal protein 50S ribosomal protein L18 uncharacterized LOC100246602 uncharacterized LOC7467411 uncharacterized LOC18104417 50S ribosomal protein L18 uncharacterized LOC101268800 50S ribosomal protein L18 uncharacterized LOC107800177 uncharacterized LOC107773519 uncharacterized LOC4330370 uncharacterized LOC103627570 39S ribosomal protein L18, mitochondrial 39S ribosomal protein L18, mitochondrial 39S ribosomal protein L18, mitochondrial 39S ribosomal protein L18, mitochondrial 50S ribosomal protein L18 50S ribosomal protein L18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03060 Protein export 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 3
sbi04626 Plant-pathogen interaction 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821567 103869346 125608835 106428871 106399284 107910140 107887353 102617749 100820550 100803727 100246602 7467411 18104417 11429855 101268800 102581110 107800177 107773519 4330370 103627570 123137819 123145133 123128040 123401770 110434343 100829705
The preparation time of this page was 2.9 [sec].