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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-r.7   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.9   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-e.2   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.bio   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.hor   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.lig   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.str   AT3G20230   Ribosomal L18p/L5e family protein 
 ath-m.4.tis   AT3G20230   Ribosomal L18p/L5e family protein 
 gma-u.5   100820550   putative L18p/L5e ribosomal protein 
 gma-u.5   100803727   50S ribosomal protein L18 
 vvi-u.5   100246602   uncharacterized LOC100246602 
 ppo-u.5   7467411   uncharacterized LOC7467411 
 ppo-u.5   18104417   uncharacterized LOC18104417 
 mtr-u.5   11429855   50S ribosomal protein L18 
 sly-u.5   101268800   uncharacterized LOC101268800 
 osa-u.5   4330370   uncharacterized LOC4330370 
 zma-u.5   103627570   uncharacterized LOC103627570 

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Top 50 coexpressed genes to AT3G20230 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G20230 (ath-u.5 coexpression data)

CoexMap"821567"


athAT3G20230 | Entrez gene ID : 821567      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_566655.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  vacu 1  (predict for NP_566655.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_566655.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G20230

.
ath-r.7
for
AT3G20230

.
ath-m.9
for
AT3G20230

.
ath-e.2
for
AT3G20230

.
ath-m.4.bio
for
AT3G20230

.
ath-m.4.hor
for
AT3G20230

.
ath-m.4.lig
for
AT3G20230

.
ath-m.4.str
for
AT3G20230

.
ath-m.4.tis
for
AT3G20230

.
gma-u.5
for
100820550

.
gma-u.5
for
100803727

.
vvi-u.5
for
100246602

.
ppo-u.5
for
7467411

.
ppo-u.5
for
18104417

.
mtr-u.5
for
11429855

.
sly-u.5
for
101268800

.
osa-u.5
for
4330370

.
zma-u.5
for
103627570

.


Ortholog ID: 9496
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G20230 LOC100820550 LOC100803727 LOC101268800 LOC4330370 LOC103627570 LOC103869346 LOC100246602 LOC18104417 LOC7467411 LOC11429855 LOC123137819 LOC123145133 LOC123401770 LOC107887353 LOC107910140 LOC106399284 LOC125608835 LOC110434343 LOC102581110 LOC102617749 LOC100829705 LOC107773519 LOC107800177
Function* Ribosomal L18p/L5e family protein putative L18p/L5e ribosomal protein 50S ribosomal protein L18 uncharacterized LOC101268800 uncharacterized LOC4330370 uncharacterized LOC103627570 50S ribosomal protein L18 uncharacterized LOC100246602 uncharacterized LOC18104417 uncharacterized LOC7467411 50S ribosomal protein L18 39S ribosomal protein L18, mitochondrial 39S ribosomal protein L18, mitochondrial 39S ribosomal protein L18, mitochondrial 50S ribosomal protein L18 50S ribosomal protein L18 50S ribosomal protein L18-like 50S ribosomal protein L18-like 50S ribosomal protein L18 50S ribosomal protein L18 uncharacterized LOC102617749 50S ribosomal protein L18 uncharacterized LOC107773519 uncharacterized LOC107800177
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03060 Protein export 2
ppo00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 11
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 3
sbi04626 Plant-pathogen interaction 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821567 100820550 100803727 101268800 4330370 103627570 103869346 100246602 18104417 7467411 11429855 123137819 123145133 123401770 107887353 107910140 106399284 125608835 110434343 102581110 102617749 100829705 107773519 107800177
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