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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MSR1   O-fucosyltransferase family protein 
 ath-u.5   MSR1   O-fucosyltransferase family protein 
 ath-r.7   MSR1   O-fucosyltransferase family protein 
 ath-e.2   MSR1   O-fucosyltransferase family protein 
 ath-m.4.bio   MSR1   O-fucosyltransferase family protein 
 ath-m.4.hor   MSR1   O-fucosyltransferase family protein 
 ath-m.4.lig   MSR1   O-fucosyltransferase family protein 
 ath-m.4.str   MSR1   O-fucosyltransferase family protein 
 ath-m.4.tis   MSR1   O-fucosyltransferase family protein 
 ath-u.5   MSR2   O-fucosyltransferase family protein 
 bra-r.6   103871274   protein MANNAN SYNTHESIS-RELATED 2 
 bra-r.6   103835351   protein MANNAN SYNTHESIS-RELATED 1 
 bra-r.6   103832835   protein MANNAN SYNTHESIS-RELATED 2-like 
 bna-r.1   106451645   protein MANNAN SYNTHESIS-RELATED 2 
 bna-r.1   125608800   protein MANNAN SYNTHESIS-RELATED 1 
 bna-r.1   125609513   protein MANNAN SYNTHESIS-RELATED 2-like 
 ghi-r.1   107906350   protein MANNAN SYNTHESIS-RELATED 1 
 ghi-r.1   107938749   protein MANNAN SYNTHESIS-RELATED 2 
 ghi-r.1   121229315   protein MANNAN SYNTHESIS-RELATED 2 
 cit-r.1   102630315   protein MANNAN SYNTHESIS-RELATED 1-like 
 gma-u.5   100818659   O-fucosyltransferase family protein 
 gma-u.5   100813879   DUF246 domain-containing protein At1g04910-like 
 gma-u.5   100807616   protein MANNAN SYNTHESIS-RELATED 1 
 vvi-u.5   100250173   protein MANNAN SYNTHESIS-RELATED 2 
 vvi-u.5   100264991   protein MANNAN SYNTHESIS-RELATED 2 
 ppo-u.5   7455528   protein MANNAN SYNTHESIS-RELATED 2 
 ppo-u.5   18101267   protein MANNAN SYNTHESIS-RELATED 2 
 mtr-u.5   25491246   protein MANNAN SYNTHESIS-RELATED 1 
 mtr-u.5   11443236   protein MANNAN SYNTHESIS-RELATED 
 sly-u.5   101263823   protein MANNAN SYNTHESIS-RELATED 2 
 sot-r.1   102579018   uncharacterized protein At1g04910-like 
 sot-r.1   102606164   uncharacterized protein At1g04910-like 
 nta-r.1   107797486   protein MANNAN SYNTHESIS-RELATED 1-like 
 nta-r.1   107803288   protein MANNAN SYNTHESIS-RELATED 1 
 nta-r.1   107828082   protein MANNAN SYNTHESIS-RELATED 1-like 
 osa-u.5   4347473   protein MANNAN SYNTHESIS-RELATED 1 
 zma-u.5   100192765   uncharacterized LOC100192765 
 zma-u.5   100276406   uncharacterized LOC100276406 
 tae-r.2   123122010   protein MANNAN SYNTHESIS-RELATED 1 
 tae-r.2   123104248   protein MANNAN SYNTHESIS-RELATED 1 
 tae-r.2   123112508   protein MANNAN SYNTHESIS-RELATED 1 
 hvu-r.1   123399611   protein MANNAN SYNTHESIS-RELATED 1-like 
 sbi-r.1   8055894   uncharacterized LOC8055894 
 bdi-r.1   100835779   protein MANNAN SYNTHESIS-RELATED 1 

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Top 50 coexpressed genes to MSR1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MSR1 (ath-m.9 coexpression data)

CoexMap"821672"


athMSR1 | Entrez gene ID : 821672      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 2 2 2 1 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010412 [list] [network] mannan metabolic process  (3 genes)  IMP  
GO:0052325 [list] [network] cell wall pectin biosynthetic process  (20 genes)  IMP  
GO CC
GO:0005797 [list] [network] Golgi medial cisterna  (58 genes)  HDA  
GO:0005802 [list] [network] trans-Golgi network  (279 genes)  HDA  
GO:0005768 [list] [network] endosome  (359 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA IDA  
GO MF
GO:0051753 [list] [network] mannan synthase activity  (8 genes)  IMP  
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  ISM  
Protein NP_566677.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 2,  cyto 1,  mito 1,  extr 1,  E.R._vacu 1,  chlo 1,  nucl 1,  plas 1,  E.R. 1,  pero 1,  cyto_mito 1,  nucl_plas 1,  E.R._plas 1  (predict for NP_566677.1)
Subcellular
localization
TargetP
scret 8  (predict for NP_566677.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MSR1
ath-u.5
for
MSR1
ath-r.7
for
MSR1
ath-e.2
for
MSR1
ath-m.4.bio
for
MSR1
ath-m.4.hor
for
MSR1
ath-m.4.lig
for
MSR1
ath-m.4.str
for
MSR1
ath-m.4.tis
for
MSR1
ath-u.5
for
MSR2
bra-r.6
for
103871274
bra-r.6
for
103835351
bra-r.6
for
103832835
bna-r.1
for
106451645
bna-r.1
for
125608800
bna-r.1
for
125609513
ghi-r.1
for
107906350
ghi-r.1
for
107938749
ghi-r.1
for
121229315
cit-r.1
for
102630315
gma-u.5
for
100818659
gma-u.5
for
100813879
gma-u.5
for
100807616
vvi-u.5
for
100250173
vvi-u.5
for
100264991
ppo-u.5
for
7455528
ppo-u.5
for
18101267
mtr-u.5
for
25491246
mtr-u.5
for
11443236
sly-u.5
for
101263823
sot-r.1
for
102579018
sot-r.1
for
102606164
nta-r.1
for
107797486
nta-r.1
for
107803288
nta-r.1
for
107828082
osa-u.5
for
4347473
zma-u.5
for
100192765
zma-u.5
for
100276406
tae-r.2
for
123122010
tae-r.2
for
123104248
tae-r.2
for
123112508
hvu-r.1
for
123399611
sbi-r.1
for
8055894
bdi-r.1
for
100835779


Ortholog ID: 3013
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr sly sot sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol MSR1 MSR2 LOC103871274 LOC103832835 LOC103869200 LOC125609513 BNAA06G02220D BNAA05G19810D LOC107906350 LOC121229315 LOC107901986 LOC102630315 LOC100813879 LOC100789772 LOC100775204 LOC100250173 LOC100264991 LOC7455528 LOC18101267 LOC25491246 LOC11443236 LOC101263823 LOC102579018 LOC102606164 LOC107803288 LOC107828082 LOC107823480 LOC4347473 LOC100276406 LOC123122010 LOC123104248 LOC123112508 LOC123399611 LOC8055894 LOC100835779
Function* O-fucosyltransferase family protein O-fucosyltransferase family protein protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 2-like protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 2-like protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 1-like DUF246 domain-containing protein At1g04910-like protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 2 protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED protein MANNAN SYNTHESIS-RELATED 2 uncharacterized protein At1g04910-like uncharacterized protein At1g04910-like protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 1-like protein MANNAN SYNTHESIS-RELATED 1-like protein MANNAN SYNTHESIS-RELATED 1 uncharacterized LOC100276406 protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 1 protein MANNAN SYNTHESIS-RELATED 1-like uncharacterized LOC8055894 protein MANNAN SYNTHESIS-RELATED 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 3
vvi04517 IgSF CAM signaling 3
vvi04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo00541 Biosynthesis of various nucleotide sugars 2
ppo01240 Biosynthesis of cofactors 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04814 Motor proteins 2
nta04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04814 Motor proteins 2
nta04820 Cytoskeleton in muscle cells 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821672 841588 103871274 103832835 103869200 125609513 106346052 106421833 107906350 121229315 107901986 102630315 100813879 100789772 100775204 100250173 100264991 7455528 18101267 25491246 11443236 101263823 102579018 102606164 107803288 107828082 107823480 4347473 100276406 123122010 123104248 123112508 123399611 8055894 100835779
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