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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   4CL5   4-coumarate:CoA ligase 5 
 ath-u.5   4CL5   4-coumarate:CoA ligase 5 
 ath-r.7   4CL5   4-coumarate:CoA ligase 5 
 ath-e.2   4CL5   4-coumarate:CoA ligase 5 
 ath-m.4.bio   4CL5   4-coumarate:CoA ligase 5 
 ath-m.4.hor   4CL5   4-coumarate:CoA ligase 5 
 ath-m.4.lig   4CL5   4-coumarate:CoA ligase 5 
 ath-m.4.str   4CL5   4-coumarate:CoA ligase 5 
 ath-m.4.tis   4CL5   4-coumarate:CoA ligase 5 
 bra-r.6   103859897   4-coumarate--CoA ligase 4 
 bna-r.1   106389369   4-coumarate--CoA ligase 4 
 bna-r.1   106439660   4-coumarate--CoA ligase 4 

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Top 50 coexpressed genes to 4CL5 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4CL5 (ath-m.9 coexpression data)

CoexMap"821677"


ath4CL5 | Entrez gene ID : 821677      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00130 [list] [network] Ubiquinone and other terpenoid-quinone biosynthesis (40 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (127 genes)
GO BP
GO:0009699 [list] [network] phenylpropanoid biosynthetic process  (82 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0016207 [list] [network] 4-coumarate-CoA ligase activity  (13 genes)  IDA  
Protein NP_001326760.1 [sequence] [blastp]
NP_001326761.1 [sequence] [blastp]
NP_001326762.1 [sequence] [blastp]
NP_188760.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  plas 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  E.R._plas 2  (predict for NP_001326760.1)
chlo 2,  plas 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  E.R._plas 2  (predict for NP_001326761.1)
chlo 2,  vacu 2,  E.R. 2,  E.R._vacu 2,  plas 1,  cyto_E.R. 1  (predict for NP_001326762.1)
vacu 3,  chlo 2,  E.R. 2,  plas 1,  cyto_E.R. 1  (predict for NP_188760.3)
Subcellular
localization
TargetP
other 9  (predict for NP_001326760.1)
other 9  (predict for NP_001326761.1)
other 9  (predict for NP_001326762.1)
other 9  (predict for NP_188760.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
4CL5
ath-u.5
for
4CL5
ath-r.7
for
4CL5
ath-e.2
for
4CL5
ath-m.4.bio
for
4CL5
ath-m.4.hor
for
4CL5
ath-m.4.lig
for
4CL5
ath-m.4.str
for
4CL5
ath-m.4.tis
for
4CL5
bra-r.6
for
103859897
bna-r.1
for
106389369
bna-r.1
for
106439660


Ortholog ID: 22659
Species ath bra bna bna
Symbol 4CL5 LOC103859897 LOC106389369 LOC106439660
Function* 4-coumarate:CoA ligase 5 4-coumarate--CoA ligase 4 4-coumarate--CoA ligase 4 4-coumarate--CoA ligase 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 14
ath00941 Flavonoid biosynthesis 4
ath00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ath01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 14
bra00360 Phenylalanine metabolism 6
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 5
bra00941 Flavonoid biosynthesis 5
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 6
bna00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 6
bna00940 Phenylpropanoid biosynthesis 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821677 103859897 106389369 106439660
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