Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT3G22690   LOW protein: PPR containing-like protein 
 ath-u.5   AT3G22690   LOW protein: PPR containing-like protein 
 ath-r.7   AT3G22690   LOW protein: PPR containing-like protein 
 ath-e.2   AT3G22690   LOW protein: PPR containing-like protein 
 ath-m.4.bio   AT3G22690   LOW protein: PPR containing-like protein 
 ath-m.4.hor   AT3G22690   LOW protein: PPR containing-like protein 
 ath-m.4.lig   AT3G22690   LOW protein: PPR containing-like protein 
 ath-m.4.str   AT3G22690   LOW protein: PPR containing-like protein 
 ath-m.4.tis   AT3G22690   LOW protein: PPR containing-like protein 
 bra-r.6   103869017   pentatricopeptide repeat-containing protein At3g22690 
 bna-r.1   125596848   pentatricopeptide repeat-containing protein At3g22690-like 
 bna-r.1   106451772   pentatricopeptide repeat-containing protein At3g22690-like 
 bna-r.1   106395409   pentatricopeptide repeat-containing protein At3g22690-like 
 ghi-r.1   107914881   pentatricopeptide repeat-containing protein At3g22690 
 ghi-r.1   107897695   pentatricopeptide repeat-containing protein At3g22690 
 cit-r.1   102617724   pentatricopeptide repeat-containing protein At3g22690 
 gma-u.5   100805041   pentatricopeptide repeat-containing protein At3g22690 
 vvi-u.5   100266544   pentatricopeptide repeat-containing protein At3g22690 
 mtr-u.5   11441453   pentatricopeptide repeat-containing protein At3g22690 
 sly-u.5   101252818   pentatricopeptide repeat-containing protein At3g22690 
 sot-r.1   102596707   pentatricopeptide repeat-containing protein At3g22690-like 
 nta-r.1   107759760   pentatricopeptide repeat-containing protein At3g22690-like 
 nta-r.1   107806740   pentatricopeptide repeat-containing protein At3g22690-like 

close


Top 50 coexpressed genes to AT3G22690 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G22690 (ath-m.9 coexpression data)

CoexMap"821840"


athAT3G22690 | Entrez gene ID : 821840      
Species ath bra bna ghi cit gma vvi mtr sly sot nta bdi osa tae ppo zma cre sbi hvu
Paralog 9 1 3 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048564 [list] [network] photosystem I assembly  (17 genes)  IDA  
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (26 genes)  IEP  
GO:0010207 [list] [network] photosystem II assembly  (27 genes)  IDA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (71 genes)  IMP  
GO:0009451 [list] [network] RNA modification  (230 genes)  IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
Protein NP_001189950.1 [sequence] [blastp]
NP_001326902.1 [sequence] [blastp]
NP_188908.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001189950.1)
chlo 7,  extr 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001326902.1)
chlo 6,  nucl 1,  cyto 1,  extr 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_188908.2)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001189950.1)
chlo 6  (predict for NP_001326902.1)
chlo 6  (predict for NP_188908.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT3G22690
ath-u.5
for
AT3G22690
ath-r.7
for
AT3G22690
ath-e.2
for
AT3G22690
ath-m.4.bio
for
AT3G22690
ath-m.4.hor
for
AT3G22690
ath-m.4.lig
for
AT3G22690
ath-m.4.str
for
AT3G22690
ath-m.4.tis
for
AT3G22690
bra-r.6
for
103869017
bna-r.1
for
125596848
bna-r.1
for
106451772
bna-r.1
for
106395409
ghi-r.1
for
107914881
ghi-r.1
for
107897695
cit-r.1
for
102617724
gma-u.5
for
100805041
vvi-u.5
for
100266544
mtr-u.5
for
11441453
sly-u.5
for
101252818
sot-r.1
for
102596707
nta-r.1
for
107759760
nta-r.1
for
107806740


Ortholog ID: 12901
Species ath bra bna bna bna ghi ghi cit gma vvi mtr sly sot nta nta
Symbol AT3G22690 LOC103869017 LOC125596848 LOC106451772 LOC106395409 LOC107914881 LOC107897695 LOC102617724 LOC100805041 LOC100266544 LOC11441453 LOC101252818 LOC102596707 LOC107759760 LOC107806740
Function* LOW protein: PPR containing-like protein pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690-like pentatricopeptide repeat-containing protein At3g22690-like pentatricopeptide repeat-containing protein At3g22690-like pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690 pentatricopeptide repeat-containing protein At3g22690-like pentatricopeptide repeat-containing protein At3g22690-like pentatricopeptide repeat-containing protein At3g22690-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821840 103869017 125596848 106451772 106395409 107914881 107897695 102617724 100805041 100266544 11441453 101252818 102596707 107759760 107806740
The preparation time of this page was 0.2 [sec].