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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   TRM11   tRNA modification 11 protein 
 ath-u.5   TRM11   tRNA modification 11 protein 
 ath-r.7   TRM11   tRNA modification 11 protein 
 ath-e.2   TRM11   tRNA modification 11 protein 
 ath-m.4.bio   TRM11   tRNA modification 11 protein 
 ath-m.4.hor   TRM11   tRNA modification 11 protein 
 ath-m.4.lig   TRM11   tRNA modification 11 protein 
 ath-m.4.str   TRM11   tRNA modification 11 protein 
 ath-m.4.tis   TRM11   tRNA modification 11 protein 
 bra-r.6   103875301   tRNA (guanine(10)-N2)-methyltransferase homolog 
 bra-r.6   103854318   tRNA (guanine(10)-N2)-methyltransferase homolog 
 bna-r.1   111207050   tRNA (guanine(10)-N2)-methyltransferase homolog 
 bna-r.1   125580264   tRNA (guanine(10)-N2)-methyltransferase homolog 
 bna-r.1   106410617   tRNA (guanine(10)-N2)-methyltransferase homolog 
 ghi-r.1   107894055   tRNA (guanine(10)-N2)-methyltransferase homolog 
 ghi-r.1   107919961   tRNA (guanine(10)-N2)-methyltransferase homolog 
 ghi-r.1   107928916   tRNA (guanine(10)-N2)-methyltransferase homolog 
 cit-r.1   102627618   uncharacterized LOC102627618 
 gma-u.5   100814705   tRNA (guanine(10)-N2)-methyltransferase homolog 
 gma-u.5   100790476   tRNA (guanine(10)-N2)-methyltransferase homolog 
 vvi-u.5   100255656   uncharacterized LOC100255656 
 ppo-u.5   7473017   uncharacterized LOC7473017 
 mtr-u.5   25493300   tRNA (guanine(10)-N2)-methyltransferase homolog 
 sly-u.5   101246388   uncharacterized LOC101246388 
 sot-r.1   102592975   tRNA (guanine(10)-N2)-methyltransferase homolog 
 nta-r.1   107763736   uncharacterized LOC107763736 
 nta-r.1   107786049   uncharacterized LOC107786049 
 osa-u.5   4329664   uncharacterized LOC4329664 
 zma-u.5   100280406   uncharacterized LOC100280406 
 tae-r.2   123054737   tRNA (guanine(10)-N2)-methyltransferase homolog 
 tae-r.2   123060501   tRNA (guanine(10)-N2)-methyltransferase homolog 
 tae-r.2   123046896   tRNA (guanine(10)-N2)-methyltransferase homolog 
 hvu-r.1   123427973   tRNA (guanine(10)-N2)-methyltransferase homolog 
 hvu-r.1   123439550   tRNA (guanine(10)-N2)-methyltransferase homolog 
 sbi-r.1   8064270   tRNA (guanine(10)-N2)-methyltransferase homolog 
 bdi-r.1   100840754   tRNA (guanine(10)-N2)-methyltransferase homolog 
 cre-r.1   CHLRE_08g359100v5   uncharacterized protein 

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Top 50 coexpressed genes to TRM11 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM11 (ath-m.9 coexpression data)

CoexMap"822245"


athTRM11 | Entrez gene ID : 822245      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 1 1 1 2 1 1 3 2 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080180 [list] [network] 2-methylguanosine metabolic process  (1 genes)  IMP  
GO:0006400 [list] [network] tRNA modification  (41 genes)  IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
Protein NP_566792.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for NP_566792.1)
Subcellular
localization
TargetP
scret 5,  other 3  (predict for NP_566792.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
TRM11
ath-u.5
for
TRM11
ath-r.7
for
TRM11
ath-e.2
for
TRM11
ath-m.4.bio
for
TRM11
ath-m.4.hor
for
TRM11
ath-m.4.lig
for
TRM11
ath-m.4.str
for
TRM11
ath-m.4.tis
for
TRM11
bra-r.6
for
103875301
bra-r.6
for
103854318
bna-r.1
for
111207050
bna-r.1
for
125580264
bna-r.1
for
106410617
ghi-r.1
for
107894055
ghi-r.1
for
107919961
ghi-r.1
for
107928916
cit-r.1
for
102627618
gma-u.5
for
100814705
gma-u.5
for
100790476
vvi-u.5
for
100255656
ppo-u.5
for
7473017
mtr-u.5
for
25493300
sly-u.5
for
101246388
sot-r.1
for
102592975
nta-r.1
for
107763736
nta-r.1
for
107786049
osa-u.5
for
4329664
zma-u.5
for
100280406
tae-r.2
for
123054737
tae-r.2
for
123060501
tae-r.2
for
123046896
hvu-r.1
for
123427973
hvu-r.1
for
123439550
sbi-r.1
for
8064270
bdi-r.1
for
100840754
cre-r.1
for
CHLRE_08g359100v5


Ortholog ID: 5765
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu hvu sbi bdi cre
Symbol TRM11 LOC103875301 LOC103854318 LOC106410617 LOC106402390 LOC106349338 LOC107894055 LOC107928916 LOC107900967 LOC102627618 LOC100814705 LOC100790476 LOC100255656 LOC7473017 LOC25493300 LOC101246388 LOC102592975 LOC107763736 LOC107786049 LOC4329664 LOC100280406 LOC123060501 LOC123069054 LOC123190571 LOC123427973 LOC123439550 LOC8064270 LOC100840754 CHLRE_08g359100v5
Function* tRNA modification 11 protein tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC102627618 tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC100255656 uncharacterized LOC7473017 tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC101246388 tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized LOC107763736 uncharacterized LOC107786049 uncharacterized LOC4329664 uncharacterized LOC100280406 tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog tRNA (guanine(10)-N2)-methyltransferase homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
sly03020 RNA polymerase 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 13
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822245 103875301 103854318 106410617 106402390 106349338 107894055 107928916 107900967 102627618 100814705 100790476 100255656 7473017 25493300 101246388 102592975 107763736 107786049 4329664 100280406 123060501 123069054 123190571 123427973 123439550 8064270 100840754 5727857
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