ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	RPS15AD	ribosomal protein S15A D
ath-u.5	RPS15AD	ribosomal protein S15A D
ath-r.7	RPS15AD	ribosomal protein S15A D
ath-e.2	RPS15AD	ribosomal protein S15A D
ath-m.4.bio	RPS15AD	ribosomal protein S15A D
ath-m.4.hor	RPS15AD	ribosomal protein S15A D
ath-m.4.lig	RPS15AD	ribosomal protein S15A D
ath-m.4.str	RPS15AD	ribosomal protein S15A D
ath-m.4.tis	RPS15AD	ribosomal protein S15A D
ath-u.5	AT5G59850	Ribosomal protein S8 family protein
ath-u.5	RPS15A	ribosomal protein S15A
bra-r.6	103871514	40S ribosomal protein S15a
bra-r.6	103851540	40S ribosomal protein S15a
bna-r.1	111212910	40S ribosomal protein S15a
bna-r.1	106385644	40S ribosomal protein S15a
bna-r.1	106372668	40S ribosomal protein S15a-1
ghi-r.1	107963940	40S ribosomal protein S15a-1
ghi-r.1	107906157	40S ribosomal protein S15a-1
ghi-r.1	107915690	40S ribosomal protein S15a-1
cit-r.1	102609319	40S ribosomal protein S15a-1
cit-r.1	102625104	40S ribosomal protein S15a-1
gma-u.5	100305645	putative ribosomal protein S15
gma-u.5	100527843	ribosomal protein S15a
gma-u.5	100799973	40S ribosomal protein S15a-1
vvi-u.5	100243108	small ribosomal subunit protein uS8
vvi-u.5	100258124	small ribosomal subunit protein uS8
ppo-u.5	7479224	40S ribosomal protein S15a-1
ppo-u.5	7458595	40S ribosomal protein S15a-1
ppo-u.5	7457926	40S ribosomal protein S15a
mtr-u.5	25494019	40S ribosomal protein S15a-1
sly-u.5	101247608	small ribosomal subunit protein uS8z/uS8w
sot-r.1	102597770	40S ribosomal protein S15a-1
sot-r.1	102591814	40S ribosomal protein S15a-1-like
sot-r.1	102588930	40S ribosomal protein S15a-1
nta-r.1	107763113	small ribosomal subunit protein uS8z/uS8w
nta-r.1	107765652	small ribosomal subunit protein uS8z/uS8w
nta-r.1	107799417	small ribosomal subunit protein uS8z/uS8w
osa-u.5	4329361	small ribosomal subunit protein uS8z/uS8w
osa-u.5	4342697	small ribosomal subunit protein uS8z/uS8w
zma-u.5	100217251	40S ribosomal protein S15a
zma-u.5	103638773	40S ribosomal protein S15a-1
zma-u.5	100280177	ribosome S8 superfamily protein
tae-r.2	100682448	40S ribosomal protein S15a-1
tae-r.2	123136157	40S ribosomal protein S15a-1
tae-r.2	123059212	40S ribosomal protein S15a-1
hvu-r.1	123444950	40S ribosomal protein S15a-1-like
hvu-r.1	123445352	40S ribosomal protein S15a-1
sbi-r.1	8079477	40S ribosomal protein S15a-1
sbi-r.1	110437148	40S ribosomal protein S15a-1
bdi-r.1	100837242	40S ribosomal protein S15a-1
bdi-r.1	100837176	40S ribosomal protein S15a-1
cre-r.1	CHLRE_05g234637v5	ribosomal protein S15a

Top 50 coexpressed genes to RPS15AD (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to RPS15AD (ath-m.9 coexpression data)

CoexMap"823747"

[Cytoscape]

Annotation

functional annotation

KEGG

ath03010 [list] [network] Ribosome (394 genes)

GO BP

GO:0006412 [list] [network] translation

(926 genes)

IEA

GO CC

GO:0022627 [list] [network] cytosolic small ribosomal subunit	(93 genes)	HDA
GO:0022626 [list] [network] cytosolic ribosome	(295 genes)	HDA
GO:0005829 [list] [network] cytosol	(2593 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM

GO MF

Protein

NP_190190.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, nucl 1, chlo 1, mito 1, extr 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1

(predict for NP_190190.1)

Subcellular
localization
TargetP

other 8

(predict for NP_190190.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for RPS15AD	ath-u.5 for RPS15AD	ath-r.7 for RPS15AD	ath-e.2 for RPS15AD	ath-m.4.bio for RPS15AD	ath-m.4.hor for RPS15AD	ath-m.4.lig for RPS15AD	ath-m.4.str for RPS15AD	ath-m.4.tis for RPS15AD	ath-u.5 for AT5G59850	ath-u.5 for RPS15A	bra-r.6 for 103871514	bra-r.6 for 103851540	bna-r.1 for 111212910	bna-r.1 for 106385644	bna-r.1 for 106372668	ghi-r.1 for 107963940	ghi-r.1 for 107906157	ghi-r.1 for 107915690	cit-r.1 for 102609319	cit-r.1 for 102625104	gma-u.5 for 100305645	gma-u.5 for 100527843	gma-u.5 for 100799973	vvi-u.5 for 100243108	vvi-u.5 for 100258124	ppo-u.5 for 7479224	ppo-u.5 for 7458595	ppo-u.5 for 7457926	mtr-u.5 for 25494019	sly-u.5 for 101247608	sot-r.1 for 102597770	sot-r.1 for 102591814	sot-r.1 for 102588930	nta-r.1 for 107763113	nta-r.1 for 107765652	nta-r.1 for 107799417	osa-u.5 for 4329361	osa-u.5 for 4342697	zma-u.5 for 100217251	zma-u.5 for 103638773	zma-u.5 for 100280177	tae-r.2 for 100682448	tae-r.2 for 123136157	tae-r.2 for 123059212	hvu-r.1 for 123444950	hvu-r.1 for 123445352	sbi-r.1 for 8079477	sbi-r.1 for 110437148	bdi-r.1 for 100837242	bdi-r.1 for 100837176	cre-r.1 for CHLRE_05g234637v5

Ortholog

Ortholog ID: 1264

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

RPS15A

Function^*

Ribosomal protein S8 family protein

ribosomal protein S15A

40S ribosomal protein S15a

40S ribosomal protein S15a-1

40S ribosomal protein S15a

40S ribosomal protein S15a-1

small ribosomal subunit protein uS8

40S ribosomal protein S15a-1

40S ribosomal protein S15a

40S ribosomal protein S15a-1

small ribosomal subunit protein uS8z/uS8w

40S ribosomal protein S15a-1-like

40S ribosomal protein S15a-1

uncharacterized LOC102577793

small ribosomal subunit protein uS8z/uS8w

ribosome S8 superfamily protein

40S ribosomal protein S15a

40S ribosomal protein S15a-1

40S ribosomal protein S15a-1-like

40S ribosomal protein S15a-1

ribosomal protein S15a

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	7
bna00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	16
ghi04141	Protein processing in endoplasmic reticulum	3
ghi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	14
gma03008	Ribosome biogenesis in eukaryotes	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	6
nta00061	Fatty acid biosynthesis	2
nta00780	Biotin metabolism	2
nta01212	Fatty acid metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	7
nta00061	Fatty acid biosynthesis	2
nta00780	Biotin metabolism	2
nta01212	Fatty acid metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	6
nta00061	Fatty acid biosynthesis	2
nta00780	Biotin metabolism	2
nta01212	Fatty acid metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	14
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	13
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	13
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	19

Expression

Expression pattern

Entrez Gene ID^*

836107

837291

103871514

103851540

103836425

106357794

106411828

106419979

107963940

107906157

107918144

102609319

102625104

100806820

100814599

100798674

100243108

100258124

7458595

7457926

18094398

25494019

101247608

102591814

102588930

102577793

107765652

107799417

107801674

4329361

4342697

100280177

100280584

103632212

123059212

123071345

123079681

123444950

123445352

8079477

110437148

100837242

100837176

5726205

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	2	3	3	2	3	2	3	1	1	3	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to RPS15AD (ath-m.9 coexpression data)

Top 50 enrichment test to RPS15AD (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**