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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107963940   40S ribosomal protein S15a-1 
 ath-u.5   RPS15AD   ribosomal protein S15A D 
 ath-u.5   AT5G59850   Ribosomal protein S8 family protein 
 gma-u.5   100806820   40S ribosomal protein S15a-1 
 gma-u.5   100799973   40S ribosomal protein S15a-1 
 gma-u.5   100798674   40S ribosomal protein S15a-1 
 vvi-u.5   100258124   small ribosomal subunit protein uS8 
 vvi-u.5   100243108   small ribosomal subunit protein uS8 
 ppo-u.5   7479224   40S ribosomal protein S15a-1 
 ppo-u.5   18094398   40S ribosomal protein S15a-1 
 ppo-u.5   7457926   40S ribosomal protein S15a 
 mtr-u.5   25494019   40S ribosomal protein S15a-1 
 sly-u.5   101247608   small ribosomal subunit protein uS8z/uS8w 
 osa-u.5   4342697   small ribosomal subunit protein uS8z/uS8w 
 osa-u.5   4329361   small ribosomal subunit protein uS8z/uS8w 
 zma-u.5   103638773   40S ribosomal protein S15a-1 
 zma-u.5   100280584   40S ribosomal protein S15a 
 zma-u.5   100280177   ribosome S8 superfamily protein 

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Top 50 coexpressed genes to 107963940 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107963940 (ghi-r.1 coexpression data)

CoexMap"107963940"


ghiLOC107963940 | Entrez gene ID : 107963940    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 2 3 2 3 1 1 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (268 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
Protein XP_016755983.1 [sequence] [blastp]
XP_016755985.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  mito 1,  extr 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016755983.1)
cyto 6,  nucl 1,  chlo 1,  mito 1,  extr 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016755985.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016755983.1)
other 7  (predict for XP_016755985.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107963940

.
ath-u.5
for
RPS15AD

.
ath-u.5
for
AT5G59850

.
gma-u.5
for
100806820

.
gma-u.5
for
100799973

.
gma-u.5
for
100798674

.
vvi-u.5
for
100258124

.
vvi-u.5
for
100243108

.
ppo-u.5
for
7479224

.
ppo-u.5
for
18094398

.
ppo-u.5
for
7457926

.
mtr-u.5
for
25494019

.
sly-u.5
for
101247608

.
osa-u.5
for
4342697

.
osa-u.5
for
4329361

.
zma-u.5
for
103638773

.
zma-u.5
for
100280584

.
zma-u.5
for
100280177

.


Ortholog ID: 1264
Species ath gma gma osa osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G59850 LOC100814599 LOC100806820 LOC4329361 LOC4342697 LOC100280584 LOC103632212 LOC103836425 LOC103851540 LOC100258124 LOC100243108 LOC7458595 LOC18094398 LOC25494019 LOC123079681 LOC123059212 LOC123445352 LOC123444950 LOC107963940 LOC107918144 LOC106419979 LOC106357794 CHLRE_05g234637v5 LOC110437148 LOC8079477 LOC102588930 LOC102591814 LOC102625104 LOC102609319 LOC100837176 LOC100837242 LOC107801674 LOC107799417
Function* Ribosomal protein S8 family protein 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 small ribosomal subunit protein uS8z/uS8w small ribosomal subunit protein uS8z/uS8w 40S ribosomal protein S15a 40S ribosomal protein S15a-1 40S ribosomal protein S15a 40S ribosomal protein S15a small ribosomal subunit protein uS8 small ribosomal subunit protein uS8 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1-like 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 ribosomal protein S15a 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1-like 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 40S ribosomal protein S15a-1 small ribosomal subunit protein uS8z/uS8w small ribosomal subunit protein uS8z/uS8w
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03008 Ribosome biogenesis in eukaryotes 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836107 100814599 100806820 4329361 4342697 100280584 103632212 103836425 103851540 100258124 100243108 7458595 18094398 25494019 123079681 123059212 123445352 123444950 107963940 107918144 106419979 106357794 5726205 110437148 8079477 102588930 102591814 102625104 102609319 100837176 100837242 107801674 107799417
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