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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   STV1   Ribosomal protein L24e family protein 
 ath-u.5   STV1   Ribosomal protein L24e family protein 
 ath-r.7   STV1   Ribosomal protein L24e family protein 
 ath-e.2   STV1   Ribosomal protein L24e family protein 
 ath-m.4.bio   STV1   Ribosomal protein L24e family protein 
 ath-m.4.hor   STV1   Ribosomal protein L24e family protein 
 ath-m.4.lig   STV1   Ribosomal protein L24e family protein 
 ath-m.4.str   STV1   Ribosomal protein L24e family protein 
 ath-m.4.tis   STV1   Ribosomal protein L24e family protein 
 ath-u.5   RPL24A   ribosomal protein L24 
 bra-r.6   103872162   60S ribosomal protein L24-2 
 bra-r.6   103841233   60S ribosomal protein L24-2 
 bra-r.6   103850277   60S ribosomal protein L24-2 
 bna-r.1   111203634   60S ribosomal protein L24-2 
 bna-r.1   125598291   60S ribosomal protein L24-1-like 
 bna-r.1   106389137   60S ribosomal protein L24-2 
 ghi-r.1   107930258   60S ribosomal protein L24-1 
 ghi-r.1   107889786   60S ribosomal protein L24 
 ghi-r.1   121223562   60S ribosomal protein L24 
 cit-r.1   102609484   60S ribosomal protein L24 
 cit-r.1   102617082   60S ribosomal protein L24 
 gma-u.5   100499884   60S ribosomal protein L24 
 gma-u.5   100499979   uncharacterized LOC100499979 
 gma-u.5   100791767   60S ribosomal protein L24-like 
 vvi-u.5   100252367   large ribosomal subunit protein eL24 
 vvi-u.5   100246956   large ribosomal subunit protein eL24 
 vvi-u.5   100245887   large ribosomal subunit protein eL24 
 ppo-u.5   7474035   60S ribosomal protein L24 
 ppo-u.5   7493568   60S ribosomal protein L24 
 ppo-u.5   7484389   60S ribosomal protein L24 
 mtr-u.5   25499365   60S ribosomal protein L24 
 mtr-u.5   11434130   60S ribosomal protein L24 
 mtr-u.5   112416759   60S ribosomal protein L24 
 sly-u.5   101249118   large ribosomal subunit protein eL24 
 sly-u.5   101266177   large ribosomal subunit protein eL24-like 
 sly-u.5   101252133   large ribosomal subunit protein eL24 
 sot-r.1   102577564   ribosomal protein L24-like protein 
 sot-r.1   102592502   60S ribosomal protein L24-like 
 sot-r.1   102596593   60S ribosomal protein L24-like 
 nta-r.1   107805336   large ribosomal subunit protein eL24 
 nta-r.1   107808292   large ribosomal subunit protein eL24 
 nta-r.1   107832170   large ribosomal subunit protein eL24 
 osa-u.5   4327483   large ribosomal subunit protein eL24 
 osa-u.5   4339145   large ribosomal subunit protein eL24 
 osa-u.5   4342748   large ribosomal subunit protein eL24 
 zma-u.5   100283730   60S ribosomal protein L24 
 zma-u.5   100193634   60S ribosomal protein L24-2 
 zma-u.5   100283762   60S ribosomal protein L24 
 tae-r.2   123071186   60S ribosomal protein L24 
 tae-r.2   123079545   60S ribosomal protein L24 
 tae-r.2   123113924   60S ribosomal protein L24 
 hvu-r.1   123444694   60S ribosomal protein L24 
 hvu-r.1   123452951   60S ribosomal protein L24-like 
 sbi-r.1   8064156   60S ribosomal protein L24 
 sbi-r.1   110434501   60S ribosomal protein L24 
 bdi-r.1   100832938   60S ribosomal protein L24 
 bdi-r.1   100825894   60S ribosomal protein L24 
 bdi-r.1   100825634   60S ribosomal protein L24 
 cre-r.1   CHLRE_09g391097v5   ribosomal protein L24;uncharacterized protein 

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Top 50 coexpressed genes to STV1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to STV1 (ath-m.9 coexpression data)

CoexMap"824468"


athSTV1 | Entrez gene ID : 824468      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 2 3 3 3 3 3 3 3 3 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0009955 [list] [network] adaxial/abaxial pattern specification  (39 genes)  IMP  
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  IMP  
GO:0009965 [list] [network] leaf morphogenesis  (103 genes)  IMP  
GO:0048467 [list] [network] gynoecium development  (108 genes)  IMP  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA RCA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_190870.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 2,  chlo_mito 2  (predict for NP_190870.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_190870.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
STV1
ath-u.5
for
STV1
ath-r.7
for
STV1
ath-e.2
for
STV1
ath-m.4.bio
for
STV1
ath-m.4.hor
for
STV1
ath-m.4.lig
for
STV1
ath-m.4.str
for
STV1
ath-m.4.tis
for
STV1
ath-u.5
for
RPL24A
bra-r.6
for
103872162
bra-r.6
for
103841233
bra-r.6
for
103850277
bna-r.1
for
111203634
bna-r.1
for
125598291
bna-r.1
for
106389137
ghi-r.1
for
107930258
ghi-r.1
for
107889786
ghi-r.1
for
121223562
cit-r.1
for
102609484
cit-r.1
for
102617082
gma-u.5
for
100499884
gma-u.5
for
100499979
gma-u.5
for
100791767
vvi-u.5
for
100252367
vvi-u.5
for
100246956
vvi-u.5
for
100245887
ppo-u.5
for
7474035
ppo-u.5
for
7493568
ppo-u.5
for
7484389
mtr-u.5
for
25499365
mtr-u.5
for
11434130
mtr-u.5
for
112416759
sly-u.5
for
101249118
sly-u.5
for
101266177
sly-u.5
for
101252133
sot-r.1
for
102577564
sot-r.1
for
102592502
sot-r.1
for
102596593
nta-r.1
for
107805336
nta-r.1
for
107808292
nta-r.1
for
107832170
osa-u.5
for
4327483
osa-u.5
for
4339145
osa-u.5
for
4342748
zma-u.5
for
100283730
zma-u.5
for
100193634
zma-u.5
for
100283762
tae-r.2
for
123071186
tae-r.2
for
123079545
tae-r.2
for
123113924
hvu-r.1
for
123444694
hvu-r.1
for
123452951
sbi-r.1
for
8064156
sbi-r.1
for
110434501
bdi-r.1
for
100832938
bdi-r.1
for
100825894
bdi-r.1
for
100825634
cre-r.1
for
CHLRE_09g391097v5


Ortholog ID: 1698
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi bdi bdi bdi cre
Symbol STV1 RPL24A LOC103872162 LOC103850277 LOC103867272 LOC106411823 LOC106402075 LOC106367793 LOC121230354 LOC107908728 LOC107905344 LOC102609484 LOC102617082 LOC100499884 LOC100499979 LOC100499720 LOC100252367 LOC100246956 LOC100245887 LOC7474035 LOC7493568 LOC7479265 LOC25499365 LOC11434130 LOC112416759 LOC101249118 LOC101266177 LOC101252133 LOC102577564 LOC102592502 LOC102596593 LOC107805336 LOC107808292 LOC107832170 LOC4327483 LOC4339145 LOC4342748 LOC100283730 LOC100193634 LOC100283762 LOC123079545 LOC123105605 LOC123444694 LOC123452951 LOC8064156 LOC110434501 LOC100832938 LOC100825894 LOC100825634 CHLRE_09g391097v5
Function* Ribosomal protein L24e family protein ribosomal protein L24 60S ribosomal protein L24-2 60S ribosomal protein L24-2 60S ribosomal protein L24-1 60S ribosomal protein L24-1 60S ribosomal protein L24-2 60S ribosomal protein L24-2 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 uncharacterized LOC100499979 uncharacterized LOC100499720 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24-like large ribosomal subunit protein eL24 ribosomal protein L24-like protein 60S ribosomal protein L24-like 60S ribosomal protein L24-like large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 large ribosomal subunit protein eL24 60S ribosomal protein L24 60S ribosomal protein L24-2 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24-like 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 60S ribosomal protein L24 ribosomal protein L24;uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 20
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824468 818234 103872162 103850277 103867272 106411823 106402075 106367793 121230354 107908728 107905344 102609484 102617082 100499884 100499979 100499720 100252367 100246956 100245887 7474035 7493568 7479265 25499365 11434130 112416759 101249118 101266177 101252133 102577564 102592502 102596593 107805336 107808292 107832170 4327483 4339145 4342748 100283730 100193634 100283762 123079545 123105605 123444694 123452951 8064156 110434501 100832938 100825894 100825634 5720646
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